RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NAA40Q86UY6 237 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 OR6X1Q8NH79 312 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 LRRC46Q96FV0 321 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 PNRC2Q9NPJ4 139 aaKnown RBP22.35■■□□□ 1.17
C9orf40-201ENST00000376854 ANAPC10Q9UM13 185 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 CSAG2Q9Y5P2 127 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 VPS13AQ96RL7 3174 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 ZFAND5O76080 213 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 DCDP81605 110 aaKnown RBP22.35■■□□□ 1.17
C9orf40-201ENST00000376854 DEFA5Q01523 94 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM128Q5BJH2 165 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 ARMC10Q8N2F6 343 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 OR4K17Q8NGC6 315 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 PHF3Q92576 2039 aaKnown RBP22.35■■□□□ 1.17
C9orf40-201ENST00000376854 ASCC3Q8N3C0 2202 aaKnown RBP22.35■■□□□ 1.17
C9orf40-201ENST00000376854 A0A1W2PP11 408 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 TOX3O15405 576 aaPredicted RBP22.34■■□□□ 1.17
C9orf40-201ENST00000376854 QDPRP09417 244 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 PGAM2P15259 253 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 NAT1P18440 290 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 NPY4RP50391 375 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 VAX1Q5SQQ9 334 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 FAM122CQ6P4D5 195 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 FAM57BQ71RH2 274 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 GPER1Q99527 375 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 TRIOBPQ9H2D6 2365 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 TOR1AO14656 332 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 RAMP1O60894 148 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 CRTAPO75718 401 aaPredicted RBP22.34■■□□□ 1.17
C9orf40-201ENST00000376854 RAD51DO75771 328 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF43P17038 809 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 SFTPDP35247 375 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM50BP56557 158 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 MC2RQ01718 297 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 ACTBL2Q562R1 376 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF283Q8N7M2 679 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 OR2M3Q8NG83 312 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 DCUN1D4Q92564 292 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 NARS2Q96I59 477 aaKnown RBP22.34■■□□□ 1.17
C9orf40-201ENST00000376854 OXGR1Q96P68 337 aa22.34■■□□□ 1.17
C9orf40-201ENST00000376854 WDFY3Q8IZQ1 3526 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 ATP6V1G2-DDX39BF2Z307 99 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 CCDC36Q8IYA8 594 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 ARRDC1Q8N5I2 433 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 BOLLQ8N9W6 283 aaKnown RBP22.33■■□□□ 1.17
C9orf40-201ENST00000376854 OR5AP2Q8NGF4 316 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 CYYR1Q96J86 154 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 NMES1Q9C002 83 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 FAM117AQ9C073 453 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 PIGMQ9H3S5 423 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 C5orf66Q9H5L9 145 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 GPR132Q9UNW8 380 aa22.33■■□□□ 1.17
C9orf40-201ENST00000376854 FRYLO94915 3013 aa22.33■■□□□ 1.16
C9orf40-201ENST00000376854 CCL1P22362 96 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 DOK3Q7L591 496 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 OR56B1Q8NGI3 324 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 PIK3IP1Q96FE7 263 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 ARHGAP5-AS1Q96IT6 56 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 ZC3H10Q96K80 434 aaKnown RBP22.32■■□□□ 1.16
C9orf40-201ENST00000376854 PCDHB10Q9UN67 800 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 B3GALT1Q9Y5Z6 326 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 CCDC85CA6NKD9 419 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 ZNF726A6NNF4 738 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 K7ESF4 209 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 WDPCPO95876 746 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 ARHGDIBP52566 201 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 CYCSP99999 105 aaKnown RBP22.32■■□□□ 1.16
C9orf40-201ENST00000376854 MARC2Q969Z3 335 aa22.32■■□□□ 1.16
C9orf40-201ENST00000376854 KLK2P20151 261 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 PNLIPRP3Q17RR3 467 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 TMEM176BQ3YBM2 270 aaPredicted RBP22.31■■□□□ 1.16
C9orf40-201ENST00000376854 GUSBP11Q6P575 273 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 OR1S2Q8NGQ3 325 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 SLC22A8Q8TCC7 542 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 TMEM230Q96A57 120 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 CRB3Q9BUF7 120 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 FSCN3Q9NQT6 498 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 ADAMTS9Q9P2N4 1935 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 DNASE2O00115 360 aaPredicted RBP22.31■■□□□ 1.16
C9orf40-201ENST00000376854 KCNMB1Q16558 191 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 HIST3H3Q16695 136 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 OCSTAMPQ9BR26 566 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 URM1Q9BTM9 101 aaKnown RBP22.31■■□□□ 1.16
C9orf40-201ENST00000376854 ASF1BQ9NVP2 202 aa22.31■■□□□ 1.16
C9orf40-201ENST00000376854 TRBV6-7A0A0A0MS04 114 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 IGKV1-9A0A0C4DH69 117 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 TEX13DA0A0J9YY54 714 aaPredicted RBP22.3■■□□□ 1.16
C9orf40-201ENST00000376854 MFNGO00587 321 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 ARFRP1Q13795 201 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 SLC9A3R2Q15599 337 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 FAM189A2Q15884 450 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 DMRTC1Q5HYR2 192 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 TMPPEQ6ZT21 453 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 OR5H2Q8NGV7 314 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 STOML3Q8TAV4 291 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 RNF126Q9BV68 326 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 RARRES3Q9UL19 164 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 SFT2D2O95562 160 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 GRB2P62993 217 aaKnown RBP22.3■■□□□ 1.16
C9orf40-201ENST00000376854 CLEC18BQ6UXF7 455 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms