RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GFOD1Q9NXC2 390 aa16.01■□□□□ 0.15
PTPDC1-202ENST00000375360 WDR1O75083 606 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 HRH1P35367 487 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 GSG1Q2KHT4 349 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 C20orf196Q8IYI0 205 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 FBXL14Q8N1E6 418 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 TMEM185AQ8NFB2 350 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 OR10AC1Q8NH08 325 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF2Q9BSG1 426 aaPredicted RBP16■□□□□ 0.15
PTPDC1-202ENST00000375360 ZSWIM8A7E2V4 1837 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 VWA8A3KMH1 1905 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 PATJQ8NI35 1801 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 SP9P0CG40 484 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 PNLIPP16233 465 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 NFYAP23511 347 aaPredicted RBP16■□□□□ 0.15
PTPDC1-202ENST00000375360 PTBP1P26599 531 aaKnown RBP eCLIP16■□□□□ 0.15
PTPDC1-202ENST00000375360 RAD52P43351 418 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 GK2Q14410 553 aaPredicted RBP16■□□□□ 0.15
PTPDC1-202ENST00000375360 PLXDC2Q6UX71 529 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 SGK3Q96BR1 496 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 LRRC37A2A6NM11 1700 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 PIGBOS1A0A0B4J2F0 54 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 RAB27BO00194 218 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 HSD17B6O14756 317 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 CDONQ4KMG0 1287 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 OR51A2Q8NGJ7 313 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 LIN37Q96GY3 246 aaPredicted RBP16■□□□□ 0.15
PTPDC1-202ENST00000375360 PCP4L1A6NKN8 68 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 LINC01387J3KSC0 135 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 TSEN54Q7Z6J9 526 aaKnown RBP16■□□□□ 0.15
PTPDC1-202ENST00000375360 SLC38A9Q8NBW4 561 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 DMBX1Q8NFW5 382 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 RAB9BQ9NP90 201 aa16■□□□□ 0.15
PTPDC1-202ENST00000375360 GPM6AP51674 278 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF718Q3SXZ3 478 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 JMJD6Q6NYC1 403 aaPredicted RBP15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 COMMD7Q86VX2 200 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 ZDHHC23Q8IYP9 409 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 OR2M3Q8NG83 312 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 PAQR8Q8TEZ7 354 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 AICDAQ9GZX7 198 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 WDR54Q9H977 334 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 TAS2R5Q9NYW4 299 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 FZR1Q9UM11 496 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 MEIKINA0A087WXM9 373 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 KIR2DL3P43628 341 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 OR52W1Q6IF63 320 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 NECAP2Q9NVZ3 263 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 C1orf123Q9NWV4 160 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 ESPL1Q14674 2120 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 H7C2Y5 167 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 K7EPK0 472 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 IL11P20809 199 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 OPCMLQ14982 345 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 BRICD5Q6PL45 260 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 CCDC28AQ8IWP9 274 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 TUSC5Q8IXB3 177 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 FAM71E2Q8N5Q1 922 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 OR56B2PQ8NGI1 322 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 KIRREL1Q96J84 757 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 HS3ST3B1Q9Y662 390 aa15.99■□□□□ 0.15
PTPDC1-202ENST00000375360 SPNP16150 400 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 GLRA1P23415 457 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 PTGER4P35408 488 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF770Q6IQ21 691 aaPredicted RBP15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 MARCH1Q8TCQ1 289 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SNX18Q96RF0 628 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 RAB33BQ9H082 229 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 KCNK15Q9H427 330 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SLA2Q9H6Q3 261 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SNRNP200O75643 2136 aaKnown RBP15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 HEATR5BQ9P2D3 2071 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF816-ZNF321PA0A0X1KG74 233 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 TUBG1P23258 451 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 PTGS2P35354 604 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 RPL23AP62750 156 aaKnown RBP15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 OR6X1Q8NH79 312 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF285Q96NJ3 590 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 RGCCQ9H4X1 137 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SCPEP1Q9HB40 452 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SLC23A1Q9UHI7 598 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 C21orf140B9A014 251 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 PMS2P2O95744 297 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 TBX6O95947 436 aaPredicted RBP15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 CLDN20P56880 219 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 KISS1Q15726 138 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF573Q86YE8 665 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 OR52N4Q8NGI2 321 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 APOBEC3DQ96AK3 386 aaPredicted RBP15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 POLDIP2Q9Y2S7 368 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 DOPEY2Q9Y3R5 2298 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 WDR81Q562E7 1941 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 CATR1Q13166 79 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 OR4C16Q8NGL9 310 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 OR10R2Q8NGX6 335 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SMIM4Q8WVI0 70 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 SLAMF9Q96A28 289 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 PLPPR2Q96GM1 343 aa15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 ZNF385AQ96PM9 386 aaKnown RBP15.98■□□□□ 0.15
PTPDC1-202ENST00000375360 LNP1A1A4G5 178 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms