RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ARL6IP1Q15041 203 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 BVESQ8NE79 360 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TCEAL7Q9BRU2 100 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GNG13Q9P2W3 67 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PCDHB10Q9UN67 800 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SPINT1O43278 529 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CDC14BO60729 498 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 B4GALT1P15291 398 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 HOXB9P17482 250 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GABRG2P18507 467 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 MSR1P21757 451 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PCBD1P61457 104 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 RAB11AP62491 216 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 RPS15P62841 145 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 DEFA6Q01524 100 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PLXDC2Q6UX71 529 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PLEKHA3Q9HB20 300 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 KLK13Q9UKR3 277 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ANKUB1A6NFN9 424 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ARGFXA6NJG6 315 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C2CD4DB7Z1M9 353 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PRSS44E7EML9 344 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GPR31O00270 319 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GABRA2P47869 451 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 DUSP3P51452 185 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GPM6AP51674 278 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 KIAA0141Q14154 515 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ATPAF1Q5TC12 328 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TSEN54Q7Z6J9 526 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CNEP1R1Q8N9A8 125 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SLC38A9Q8NBW4 561 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GJC3Q8NFK1 279 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 EMG1Q92979 244 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C2orf50Q96LR7 162 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C19orf12Q9NSK7 152 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SERTAD4Q9NUC0 356 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 A0A1W2PPH5 198 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 CTLA4P16410 223 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 RFC3P40938 356 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 HOXA1P49639 335 aaPredicted RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM92Q6UXU6 159 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 OR1L3Q8NH93 324 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 NANOS1Q8WY41 292 aaKnown RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ROBO4Q8WZ75 1007 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 CMTM3Q96MX0 182 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 OPA3Q9H6K4 179 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MMP26Q9NRE1 261 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 RP1P56715 2156 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PLXND1Q9Y4D7 1925 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 H0YIG0 161 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 RNASEK-C17orf49H0YIS7 233 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ANKRD16Q6P6B7 361 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 CLEC1AQ8NC01 280 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PIGQQ9BRB3 760 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 NDRG3Q9UGV2 375 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 IFNA10P01566 189 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 IFNA4P05014 189 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 CD27P26842 260 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ABHD17BQ5VST6 288 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM268Q5VZI3 342 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 OPN5Q6U736 354 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ASB10Q8WXI3 467 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 FAM166BA8MTA8 275 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MCRIP1C9JLW8 97 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 NPIPB8E9PQR5 432 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PLPP3O14495 311 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ANGPTL7O43827 346 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MOSPD3O75425 235 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 NQO2P16083 231 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 HTD2P86397 168 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MYBPHQ13203 477 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 FZD2Q14332 565 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MIDNQ504T8 468 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF813Q6ZN06 617 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 LSMEM1Q8N8F7 131 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 DYRK2Q92630 601 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 C4orf45Q96LM5 186 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MMP17Q9ULZ9 603 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 RPH3ALQ9UNE2 315 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 A0A0B4J293 547 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 hCG_1809904A0A1W2PP81 198 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 A0A1W2PR64 198 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 A0A1W2PRV1 198 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 RER1O15258 196 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 NGFRP08138 427 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 IL11P20809 199 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ECH1Q13011 328 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF141Q15928 474 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ADAM5Q6NVV9 412 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 OR9K2Q8NGE7 335 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 CCDC74BQ96LY2 380 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 PRSS27Q9BQR3 290 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 OR11H4Q8NGC9 324 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 SGK3Q96BR1 496 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ELF5Q9UKW6 265 aaPredicted RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 MCTS1Q9ULC4 181 aaKnown RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 YBX2Q9Y2T7 364 aaKnown RBP5.86□□□□□ -1.47
SMC1A-202ENST00000375340 LINC00862A6NCI5 91 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 AQP8O94778 261 aa5.86□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF205O95201 554 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms