RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ZNF700Q9H0M5 742 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 SERINC1Q9NRX5 453 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 MMP24Q9Y5R2 645 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 K7EQS6 105 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 IFNA21P01568 189 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 TPT1P13693 172 aaKnown RBP10.85□□□□□ -0.67
NCDN-202ENST00000373243 GABRR1P24046 479 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 SLC6A8P48029 635 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 RPS11P62280 158 aaKnown RBP eCLIP10.85□□□□□ -0.67
NCDN-202ENST00000373243 SHHQ15465 462 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 TMEM92Q6UXU6 159 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 OR5D14Q8NGL3 314 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 RHOFQ9HBH0 211 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 LRP12Q9Y561 859 aa10.85□□□□□ -0.67
NCDN-202ENST00000373243 MARCH11A6NNE9 402 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 PRR32B1ATL7 298 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 TMEM225BP0DP42 221 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 RAB4AP20338 218 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 NUTF2P61970 127 aaKnown RBP10.84□□□□□ -0.67
NCDN-202ENST00000373243 DHODHQ02127 395 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 ELFN2Q5R3F8 820 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 EXOSC6Q5RKV6 272 aaKnown RBP10.84□□□□□ -0.67
NCDN-202ENST00000373243 OR8B4Q96RC9 309 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 PARPBPQ9NWS1 579 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 EHFQ9NZC4 300 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 B3GALT1Q9Y5Z6 326 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 URGCP-MRPS24S4R325 110 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 G3V3Y1 287 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 PPP1R2P9O14990 202 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 CPN1P15169 458 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 RPA2P15927 270 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 RAB6AP20340 208 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 ZNF93P35789 620 aaPredicted RBP10.84□□□□□ -0.67
NCDN-202ENST00000373243 ZNF84P51523 738 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 ZNF117Q03924 483 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 PPP1R1AQ13522 171 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 MEF2DQ14814 521 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 RNF151Q2KHN1 245 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 GAB4Q2WGN9 574 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 EIF5AL1Q6IS14 154 aaKnown RBP10.84□□□□□ -0.67
NCDN-202ENST00000373243 SPNS3Q6ZMD2 512 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 PPP1R3BQ86XI6 285 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 OR51E1Q8TCB6 317 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 ASB17Q8WXJ9 295 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 TCTN2Q96GX1 697 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 CDC6Q99741 560 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 URM1Q9BTM9 101 aaKnown RBP10.84□□□□□ -0.67
NCDN-202ENST00000373243 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
NCDN-202ENST00000373243 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 TLX3O43711 291 aaPredicted RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 OR2A4O95047 310 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 WNT11O96014 354 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 CCNOP22674 350 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 TNFRSF4P43489 277 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 CSNK1EP49674 416 aaKnown RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 NHLH2Q02577 135 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 TNFRSF9Q07011 255 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 MFGE8Q08431 387 aaPredicted RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 PRAMEF20Q5VT98 475 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 ABCA7Q8IZY2 2146 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 ADAMTS18Q8TE60 1221 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 OR2A7Q96R45 310 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 RBM24Q9BX46 236 aaKnown RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 BARX1Q9HBU1 254 aaPredicted RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 GDF2Q9UK05 429 aaPredicted RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 MEMO1Q9Y316 297 aa10.83□□□□□ -0.67
NCDN-202ENST00000373243 MTCL1Q9Y4B5 1905 aaKnown RBP10.83□□□□□ -0.67
NCDN-202ENST00000373243 TPRP12270 2363 aaKnown RBP10.83□□□□□ -0.68
NCDN-202ENST00000373243 HIST1H1BP16401 226 aaKnown RBP10.83□□□□□ -0.68
NCDN-202ENST00000373243 S100A7P31151 101 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 AFF3P51826 1226 aaKnown RBP10.83□□□□□ -0.68
NCDN-202ENST00000373243 YPEL5P62699 121 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 SPIN3Q5JUX0 258 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 GLIPR1L1Q6UWM5 242 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 Q6ZS52 159 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 FGF11Q92914 225 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 LRFN5Q96NI6 719 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 SLC46A1Q96NT5 459 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 NECAB3Q96P71 396 aaPredicted RBP10.83□□□□□ -0.68
NCDN-202ENST00000373243 TIMP4Q99727 224 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 NRIP2Q9BQI9 281 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 GPR61Q9BZJ8 451 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 H0YIG0 161 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 TNFSF12O43508 249 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 F10P00742 488 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 STARD6P59095 220 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 ZNF239Q16600 458 aaKnown RBP10.83□□□□□ -0.68
NCDN-202ENST00000373243 LRRC18Q8N456 261 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 IP6K3Q96PC2 410 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 HEATR5AQ86XA9 2040 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
NCDN-202ENST00000373243 HELZP42694 1942 aaKnown RBP10.83□□□□□ -0.68
NCDN-202ENST00000373243 A0A1W2PNR3 127 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms