RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PDE7BQ9NP56 450 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SH3BGRL2Q9UJC5 107 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 LSM5Q9Y4Y9 91 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM184BQ9Y519 407 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 NUP210LQ5VU65 1888 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 IGKV1D-8A0A087WSZ0 117 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 A0A1B0GW55 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SERINC4A6NH21 518 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM212A6NML5 194 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 F8VVB4 439 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 F8VWA3 439 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ZNHIT1O43257 154 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 NKX2-2O95096 273 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 OR6A2O95222 327 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 IFNA6P05013 189 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SNRPCP09234 159 aaKnown RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4L2P0CJ85 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4L3P0CJ86 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4L4P0CJ87 422 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4L5P0CJ88 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4L6P0CJ89 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4L7P0CJ90 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SMIM6P0DI80 62 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 RAB5AP20339 215 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 LAP3P28838 519 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 RORAP35398 523 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 PPP1CCP36873 323 aaKnown RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 RPS10P46783 165 aaKnown RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 GABRA4P48169 554 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DNASE1L1P49184 302 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CASP6P55212 293 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CLDN6P56747 220 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ACKR1Q16570 336 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF260Q3ZCT1 412 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 PLAC9Q5JTB6 97 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF529Q6P280 563 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF765Q7L2R6 523 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 MYPOPQ86VE0 399 aaPredicted RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 AVL9Q8NBF6 648 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 TMIEQ8NEW7 156 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 OTOSQ8NHW6 89 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 GAL3ST4Q96RP7 486 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ADOQ96SZ5 270 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SLC25A21Q9BQT8 299 aaPredicted RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SLC5A7Q9GZV3 580 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ALX4Q9H161 411 aaPredicted RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CERS4Q9HA82 394 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 UPB1Q9UBR1 384 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DUX4Q9UBX2 424 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 A0A0A6YYH2 397 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 A6NJ64 397 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ARPC3O15145 178 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 IL33O95760 270 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 MPIG6BO95866 241 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 IFNA2P01563 188 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CD2P06729 351 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CD63P08962 238 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CXCL1P09341 107 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SMIM10L1P0DMW3 83 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 PRF1P14222 555 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 MYOGP15173 224 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 AGAP20933 346 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 OR3A4PP47883 348 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SP3Q02447 781 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CST6Q15828 149 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 PCK2Q16822 640 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 TEX30Q5JUR7 227 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DCXRQ7Z4W1 244 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ADGRE4PQ86SQ3 457 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 DTX1Q86Y01 620 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF679Q8IYX0 411 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF101Q8IZC7 436 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ARRDC1Q8N5I2 433 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 WDSUB1Q8N9V3 476 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 HSD17B11Q8NBQ5 300 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 OR10D4PQ8NGN7 298 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 OR4K15Q8NH41 348 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ADAMTS17Q8TE56 1095 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ADAMTS18Q8TE60 1221 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 GTF3AQ92664 365 aaKnown RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 CTHRC1Q96CG8 243 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 PHYHIPLQ96FC7 376 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SMIM10Q96HG1 83 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 C14orf144Q96I85 54 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 VSTM2LQ96N03 204 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 OR8B4Q96RC9 309 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 ATG101Q9BSB4 218 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 GPR61Q9BZJ8 451 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 TWSG1Q9GZX9 223 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 WFDC1Q9HC57 220 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 SMCO4Q9NRQ5 59 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 MED29Q9NX70 200 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 FBXL17Q9UF56 701 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 GAB2Q9UQC2 676 aa4.81□□□□□ -1.64
ATG4A-204ENST00000372246 YBX2Q9Y2T7 364 aaKnown RBP4.81□□□□□ -1.64
ATG4A-204ENST00000372246 TGIF2-C20orf24A0A0A6YYL0 155 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PRSS38A1L453 326 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 FAM221AA4D161 298 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CDRT15L2A8MXV6 281 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms