RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ENPP5Q9UJA9 477 aa13.6□□□□□ -0.23
TMEM53-204ENST00000372243 CMAHPQ9Y471 501 aa13.6□□□□□ -0.23
TMEM53-204ENST00000372243 ATP23Q9Y6H3 246 aa13.6□□□□□ -0.23
TMEM53-204ENST00000372243 TENM4Q6N022 2769 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 COL12A1Q99715 3063 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 IGLV3-9A0A075B6K5 115 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 TRBV5-7A0A0A0MS05 114 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 FAM221AA4D161 298 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 A6NNC1 897 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 AIREO43918 545 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 GPX5O75715 221 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 GABARAPO95166 117 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 KITLGP21583 273 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 ACKR3P25106 362 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 TMBIM6P55061 237 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 RIPPLY1Q0D2K3 151 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 PSG7Q13046 419 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 SP5Q6BEB4 398 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-204ENST00000372243 SLC16A12Q6ZSM3 486 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 CEACAM19Q7Z692 300 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 FTMTQ8N4E7 242 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 SYNPRQ8TBG9 265 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 DERL3Q96Q80 235 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 BCL7BQ9BQE9 202 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 PLEKHA1Q9HB21 404 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 BATF3Q9NR55 127 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 TXNL4BQ9NX01 149 aaKnown RBP13.59□□□□□ -0.23
TMEM53-204ENST00000372243 GSTK1Q9Y2Q3 226 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
TMEM53-204ENST00000372243 SMIM31A0A1B0GVY4 71 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 GGT3PA6NGU5 568 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 CD300LBA8K4G0 201 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 IQCF6A8MYZ5 107 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 E7EQL1 145 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 H3BSH0 61 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 ARL6IP5O75915 188 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 IGHV3-13P01766 116 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 UCHL1P09936 223 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 MPV17P39210 176 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 SOX2P48431 317 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 FABP6P51161 128 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 INSL4Q14641 139 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 ZNF672Q499Z4 452 aaPredicted RBP13.58□□□□□ -0.23
TMEM53-204ENST00000372243 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.23
TMEM53-204ENST00000372243 SERPINA12Q8IW75 414 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 LILRB1Q8NHL6 650 aaPredicted RBP13.58□□□□□ -0.23
TMEM53-204ENST00000372243 ZNF420Q8TAQ5 688 aaPredicted RBP13.58□□□□□ -0.23
TMEM53-204ENST00000372243 PP6455Q8WZ26 134 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 MRPL24Q96A35 216 aaKnown RBP13.58□□□□□ -0.23
TMEM53-204ENST00000372243 TRMT61AQ96FX7 289 aaKnown RBP13.58□□□□□ -0.23
TMEM53-204ENST00000372243 CHCHD6Q9BRQ6 235 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 PIGLQ9Y2B2 252 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 CEPT1Q9Y6K0 416 aa13.58□□□□□ -0.23
TMEM53-204ENST00000372243 ZNF816-ZNF321PA0A0X1KG74 233 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 A1L4Q6 167 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 PLAUP00749 431 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 MAGEB1P43366 347 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 EVX1P49640 407 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 KLF3P57682 345 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-204ENST00000372243 SELENOVP59797 346 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 MSMPQ1L6U9 139 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 TMEM42Q69YG0 159 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 OR2T2Q6IF00 324 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 VHLLQ6RSH7 139 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 OR56B2PQ8NGI1 322 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 RAB2BQ8WUD1 216 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 RPL3LQ92901 407 aaKnown RBP13.58□□□□□ -0.24
TMEM53-204ENST00000372243 FGGYQ96C11 551 aa13.58□□□□□ -0.24
TMEM53-204ENST00000372243 RBM38Q9H0Z9 239 aaKnown RBP13.58□□□□□ -0.24
TMEM53-204ENST00000372243 EXOSC4Q9NPD3 245 aaKnown RBP13.58□□□□□ -0.24
TMEM53-204ENST00000372243 MRPL15Q9P015 296 aaKnown RBP13.58□□□□□ -0.24
TMEM53-204ENST00000372243 PURGQ9UJV8 347 aaKnown RBP13.58□□□□□ -0.24
TMEM53-204ENST00000372243 HELZ2Q9BYK8 2649 aaKnown RBP13.57□□□□□ -0.24
TMEM53-204ENST00000372243 PIN1P1O15428 100 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 LMX1BO60663 402 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 CST4P01036 141 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 COX6B1P14854 86 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 FAHP16930 419 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 ZNF20P17024 532 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 FSTP19883 344 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 APOBEC3AP31941 199 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-204ENST00000372243 ADIPOQQ15848 244 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 CTF1Q16619 201 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 MOGQ16653 247 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 OR5D14Q8NGL3 314 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 PIGTQ969N2 578 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 ADAT3Q96EY9 351 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-204ENST00000372243 PSMG3-AS1Q96PY0 264 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 DHRS9Q9BPW9 319 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 CHST5Q9GZS9 411 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 NAA50Q9GZZ1 169 aaKnown RBP13.57□□□□□ -0.24
TMEM53-204ENST00000372243 NOX4Q9NPH5 578 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 CISD1Q9NZ45 108 aaKnown RBP13.57□□□□□ -0.24
TMEM53-204ENST00000372243 CGGBP1Q9UFW8 167 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-204ENST00000372243 FOXJ3Q9UPW0 622 aa13.57□□□□□ -0.24
TMEM53-204ENST00000372243 LOC100506127A0A0U1RQW1 187 aa13.56□□□□□ -0.24
TMEM53-204ENST00000372243 ZNF701M0R085 212 aaPredicted RBP13.56□□□□□ -0.24
TMEM53-204ENST00000372243 ALX3O95076 343 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms