RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CENPEQ02224 2701 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 DOK2O60496 412 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 ICMTO60725 284 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 CPN1P15169 458 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 ENPP1P22413 925 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 CDAP32320 146 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 GNALP38405 381 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 CX3CR1P49238 355 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 CYB561P49447 251 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 ZNF121P58317 390 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 TAS2R19P59542 299 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 PLA2G7Q13093 441 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 ZNF468Q5VIY5 522 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 SP5Q6BEB4 398 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 GLDNQ6ZMI3 551 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 OR2W3Q7Z3T1 314 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 FAM109AQ8N4B1 249 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 TMEM229BQ8NBD8 167 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 OR11H7Q8NGC8 314 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 OR14L1PQ8NHC6 308 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 DACT3Q96B18 629 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 MRPL15Q9P015 296 aaKnown RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 ABI3Q9P2A4 366 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 CGGBP1Q9UFW8 167 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 ZNF222Q9UK12 451 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 BOKQ9UMX3 212 aaPredicted RBP12.36□□□□□ -0.43
LDB3-204ENST00000372066 FLVCR1Q9Y5Y0 555 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 NPTNQ9Y639 398 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 NCKAP5O14513 1909 aa12.36□□□□□ -0.43
LDB3-204ENST00000372066 ARPC1BO15143 372 aaKnown RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 SSNA1O43805 119 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ZG16O60844 167 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 SNAPC5O75971 98 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 KDM4BO94953 1096 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 MELTFP08582 738 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 CNR1P21554 472 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 RCVRNP35243 200 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ARG2P78540 354 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 MRPS34P82930 218 aaKnown RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 PDSS1Q5T2R2 415 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ZNF283Q8N7M2 679 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 OR8B12Q8NGG6 310 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 OR4C16Q8NGL9 310 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 C10orf35Q96D05 121 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ADAT3Q96EY9 351 aaPredicted RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 ZNF416Q9BWM5 594 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ULBP2Q9BZM5 246 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 PLA2G3Q9NZ20 509 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 UPB1Q9UBR1 384 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 A0A0U1RQV5 110 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 LRRC3CA6NJW4 275 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 G3V3Y1 287 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 TNFSF11O14788 317 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 SMAD9O15198 467 aaKnown RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 RER1O15258 196 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 CREBL2O60519 120 aaPredicted RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 IGLV3-1P01715 115 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 UBBP0CG47 229 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 GTF2F2P13984 249 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 VEGFCP49767 419 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 PMPCAQ10713 525 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ENDOGQ14249 297 aaKnown RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 SGCAQ16586 387 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ABLIM2Q6H8Q1 611 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 RPUSD3Q6P087 351 aaKnown RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 Q6ZSR3 168 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ABHD12BQ7Z5M8 362 aaPredicted RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 SPICQ8N5J4 248 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 OR51E1Q8TCB6 317 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 NABP1Q96AH0 204 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 ZNF385AQ96PM9 386 aaKnown RBP12.35□□□□□ -0.43
LDB3-204ENST00000372066 SLX1AQ9BQ83 275 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 OR10A4Q9H209 315 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 CNTD2Q9H8S5 307 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 SCP2D1Q9UJQ7 156 aa12.35□□□□□ -0.43
LDB3-204ENST00000372066 CELSR2Q9HCU4 2923 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 NCOA6Q14686 2063 aaPredicted RBP12.34□□□□□ -0.43
LDB3-204ENST00000372066 FABP7O15540 132 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 LMX1BO60663 402 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 WDPCPO95876 746 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 PTHLHP12272 177 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 KLK2P20151 261 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
LDB3-204ENST00000372066 PRKXP51817 358 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 ZMYND11Q15326 602 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
LDB3-204ENST00000372066 STEAP1BQ6NZ63 245 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms