RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ZNF254O75437 659 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 MT-ND5P03915 603 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 GALP22466 123 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 PTH2RP49190 550 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 PPOXP50336 477 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 TAS2R43P59537 309 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 EGR3Q06889 387 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 MALLQ13021 153 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 ZNF679Q8IYX0 411 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 LRRC75A-AS1Q8N1F1 130 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 RFLNBQ8N5W9 214 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 TBX5Q99593 518 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 FOXC2Q99958 501 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 TTTY10Q9BZA0 68 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 BABAM2Q9NXR7 383 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 TAAR3PQ9P1P4 343 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 GPR160Q9UJ42 338 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 IKZF2Q9UKS7 526 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 SF3B6Q9Y3B4 125 aaKnown RBP13.64□□□□□ -0.23
PFDN4-201ENST00000371419 LRP12Q9Y561 859 aa13.64□□□□□ -0.23
PFDN4-201ENST00000371419 CREBBPQ92793 2442 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 A0A1W2PQL4 384 aaPredicted RBP13.63□□□□□ -0.23
PFDN4-201ENST00000371419 PRR32B1ATL7 298 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 M0R233 179 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 PSMD9O00233 223 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 ANXA2P07355 339 aaKnown RBP13.63□□□□□ -0.23
PFDN4-201ENST00000371419 SLC2A1P11166 492 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 RAC2P15153 192 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 TGFBR1P36897 503 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 PSG7Q13046 419 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 NKPD1Q17RQ9 610 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 SNAI3Q3KNW1 292 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 FBXW12Q6X9E4 464 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 CMBLQ96DG6 245 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 PERPQ96FX8 193 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 TRIM36Q9NQ86 728 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 ITGB1BP2Q9UKP3 347 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 N6AMT1Q9Y5N5 214 aa13.63□□□□□ -0.23
PFDN4-201ENST00000371419 MAP1AP78559 2803 aaPredicted RBP13.63□□□□□ -0.23
PFDN4-201ENST00000371419 TRDV1A0A1B0GX56 115 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 HLA-DPB1P04440 258 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 FGF9P31371 208 aaPredicted RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 DCTDP32321 178 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 ALDH3B1P43353 468 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 RIDAP52758 137 aaKnown RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 ART1P52961 327 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 ATP5J2P56134 94 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 ZNF121P58317 390 aaPredicted RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 PSMA6P60900 246 aaKnown RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 ACTA2P62736 377 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 ACTG2P63267 376 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 HLXQ14774 488 aaPredicted RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 TRAM1Q15629 374 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 CD200R1LQ6Q8B3 271 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 KLBQ86Z14 1044 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 OR52H1Q8NGJ2 320 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 HAVCR1Q96D42 359 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 VRK1Q99986 396 aaPredicted RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 MS4A5Q9H3V2 200 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 AKIP1Q9NQ31 210 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 TXNL4BQ9NX01 149 aaKnown RBP13.62□□□□□ -0.23
PFDN4-201ENST00000371419 PEX16Q9Y5Y5 336 aa13.62□□□□□ -0.23
PFDN4-201ENST00000371419 A0A075B6Q4 140 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 TIMM8AO60220 97 aaPredicted RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 IL1AP01583 271 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 KRT8P05787 483 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 KITLGP21583 273 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 S100A5P33763 92 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 GK2Q14410 553 aaPredicted RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 TMEM255AQ5JRV8 349 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 FAM57BQ71RH2 274 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 SSX6Q7RTT6 188 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 PRSS45Q7RTY3 260 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 EGFL6Q8IUX8 553 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 SNX33Q8WV41 574 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 PGAM5Q96HS1 289 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 KCTD7Q96MP8 289 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 RAB1BQ9H0U4 201 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 RNF167Q9H6Y7 350 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 BRD7Q9NPI1 651 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 CGGBP1Q9UFW8 167 aaPredicted RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 MRM2Q9UI43 246 aaKnown RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 PURGQ9UJV8 347 aaKnown RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 PLSCR5A0PG75 271 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 C5orf63A6NC05 138 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 MAGEB4O15481 346 aaPredicted RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 TBX1O43435 398 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 XRCC2O43543 280 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 ERCC1P07992 297 aaPredicted RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 CELP19835 753 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 ANOS1P23352 680 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 RORCP51449 518 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 RPS25P62851 125 aaKnown RBP13.61□□□□□ -0.23
PFDN4-201ENST00000371419 ZNF85Q03923 595 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 ALKBH6Q3KRA9 238 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 GLYATL3Q5SZD4 288 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 PGAP1Q75T13 922 aa13.61□□□□□ -0.23
PFDN4-201ENST00000371419 MRPL21Q7Z2W9 205 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms