RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL17A1-202ENST00000369733 UQCC1Q9NVA1 299 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 LAMP3Q9UQV4 416 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 MMP24Q9Y5R2 645 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 NTN1O95631 604 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 IAPPP10997 89 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF90Q03938 601 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 FBLIM1Q8WUP2 373 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 C6orf106Q9H6K1 298 aaPredicted RBP14.34□□□□□ -0.11
COL17A1-202ENST00000369733 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.11
COL17A1-202ENST00000369733 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.11
COL17A1-202ENST00000369733 A0A1W2PPQ1 181 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 FRG2CA6NGY1 282 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 OGG1O15527 345 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 NKX2-2O95096 273 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 KCNJ3P48549 501 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 TMEM91Q6ZNR0 172 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 PPP1R3EQ9H7J1 279 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 ZFC3H1O60293 1989 aaKnown RBP14.33□□□□□ -0.11
COL17A1-202ENST00000369733 GLI3P10071 1580 aa14.33□□□□□ -0.11
COL17A1-202ENST00000369733 ABOP16442 354 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 TCN2P20062 427 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 TTC3P53804 2025 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 OR1D5P58170 312 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 TLE1Q04724 770 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 INPP5JQ15735 1006 aaPredicted RBP14.33□□□□□ -0.12
COL17A1-202ENST00000369733 RNF151Q2KHN1 245 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 H2BFWTQ7Z2G1 175 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 BHLHE23Q8NDY6 225 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 PPP1R3CQ9UQK1 317 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 CCDC187A0A096LP49 1063 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 CSNK1EP49674 416 aaKnown RBP14.33□□□□□ -0.12
COL17A1-202ENST00000369733 VWA2Q5GFL6 755 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 BTNL8Q6UX41 500 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 OR8U1Q8NH10 309 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 PLSCR5A0PG75 271 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 DUS4LO95620 317 aaKnown RBP14.33□□□□□ -0.12
COL17A1-202ENST00000369733 NRASP01111 189 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 APOA2P02652 100 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 SEMG1P04279 462 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 NAT2P11245 290 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 FKBP2P26885 142 aaKnown RBP14.33□□□□□ -0.12
COL17A1-202ENST00000369733 UBAC2Q8NBM4 344 aa14.33□□□□□ -0.12
COL17A1-202ENST00000369733 ACTR3CQ9C0K3 210 aaPredicted RBP14.33□□□□□ -0.12
COL17A1-202ENST00000369733 MLF1P58340 268 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 PRSS54Q6PEW0 395 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 OR52N4Q8NGI2 321 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 AKR7LQ8NHP1 331 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 GPR119Q8TDV5 335 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 C7orf66A4D0T2 115 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 H0YIG0 161 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 CD160O95971 181 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 C1QCP02747 245 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 CDKN2AP42771 156 aaKnown RBP14.32□□□□□ -0.12
COL17A1-202ENST00000369733 DHODHQ02127 395 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 LINC01555Q8NAE3 123 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 OR5M9Q8NGP3 310 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 INTS12Q96CB8 462 aaKnown RBP14.32□□□□□ -0.12
COL17A1-202ENST00000369733 FAM103A1Q9BTL3 118 aaKnown RBP14.32□□□□□ -0.12
COL17A1-202ENST00000369733 FBXO34Q9NWN3 711 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 LSM2Q9Y333 95 aaKnown RBP14.32□□□□□ -0.12
COL17A1-202ENST00000369733 CBY1Q9Y3M2 126 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 A6NCN8 305 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 OR2W5A6NFC9 320 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 NPIPB8E9PQR5 432 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 GLRA1P23415 457 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 NPAS1Q99742 590 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 MTCH1Q9NZJ7 389 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 PPP2CBP62714 309 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 PPP2CAP67775 309 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 CNEP1R1Q8N9A8 125 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 OR2AE1Q8NHA4 323 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 REEP6Q96HR9 211 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 RSRP1Q9BUV0 290 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 SLC35B3Q9H1N7 401 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 SMCHD1A6NHR9 2005 aa14.32□□□□□ -0.12
COL17A1-202ENST00000369733 NUP214P35658 2090 aaPredicted RBP14.32□□□□□ -0.12
COL17A1-202ENST00000369733 ZNF426Q9BUY5 554 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 KCNK15Q9H427 330 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 ZMAT5Q9UDW3 170 aaKnown RBP14.31□□□□□ -0.12
COL17A1-202ENST00000369733 SLC17A4Q9Y2C5 497 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 EFSO43281 561 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 PNLIPRP2P54317 469 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 SP6Q3SY56 376 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 ZNF362Q5T0B9 420 aaPredicted RBP14.31□□□□□ -0.12
COL17A1-202ENST00000369733 C11orf40Q8WZ69 217 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 BSCL2Q96G97 398 aaPredicted RBP14.31□□□□□ -0.12
COL17A1-202ENST00000369733 OXGR1Q96P68 337 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 PSENENQ9NZ42 101 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 H0Y8G0 127 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 CST7O76096 145 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 VAMP5O95183 116 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 OLFM2O95897 454 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 HNF1AP20823 631 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 FGF7P21781 194 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 ETFBKMTQ8IXQ9 262 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 OR6S1Q8NH40 331 aa14.31□□□□□ -0.12
COL17A1-202ENST00000369733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms