RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C1orf198Q9H425 327 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 B3GAT2Q9NPZ5 323 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 SNTG1Q9NSN8 517 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 SLCO1C1Q9NYB5 712 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 CYB5R1Q9UHQ9 305 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 POLR1DQ9Y2S0 133 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 ZNF879B4DU55 563 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 CLDN25C9JDP6 229 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 RPP14O95059 124 aaKnown RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 MPZL1O95297 269 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 IGHG3P01860 377 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 CPN1P15169 458 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 PCP4P48539 62 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 SELENOPP49908 381 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 SRYQ05066 204 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 RNPS1Q15287 305 aaKnown RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZNF829Q3KNS6 432 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 ACSM3Q53FZ2 586 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 RIPPLY2Q5TAB7 128 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 CHMP1BQ7LBR1 199 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 AAED1Q7RTV5 226 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 CROCCP3Q8IVE0 287 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 Q8NA96 180 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 OR2AJ1Q8NGZ0 328 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 OR5AK2Q8NH90 309 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 RNF133Q8WVZ7 376 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ROBO4Q8WZ75 1007 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 BORCS5Q969J3 196 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZNF845Q96IR2 970 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 DCLRE1CQ96SD1 692 aaKnown RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 DIRC2Q96SL1 478 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 AMELYQ99218 206 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 SEC61A2Q9H9S3 476 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 RNF122Q9H9V4 155 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ELOVL3Q9HB03 270 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 PLGRKTQ9HBL7 147 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 POLE4Q9NR33 117 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ING1Q9UK53 422 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 LRP12Q9Y561 859 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 CSAG2Q9Y5P2 127 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 SMG1Q96Q15 3661 aaKnown RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 OR6C65A6NJZ3 312 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZNF878C9JN71 531 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 F5H697 171 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 LDLRAD4O15165 306 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZFPL1O95159 310 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 MSR1P21757 451 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 DCTDP32321 178 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 OPRL1P41146 370 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ART1P52961 327 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 NANOS3P60323 173 aaKnown RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 MXD1Q05195 221 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 HNRNPA0Q13151 305 aaKnown RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZNF846Q147U1 533 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZNF169Q14929 603 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 SFRP4Q6FHJ7 346 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 CEACAM19Q7Z692 300 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.64□□□□□ -1.19
TPM3-213ENST00000368545 GPR137CQ8N3F9 429 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 OR2G2Q8NGZ5 317 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 C4orf45Q96LM5 186 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 CMTM3Q96MX0 182 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 WDFY2Q96P53 400 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 PDCD1LG2Q9BQ51 273 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 NIPAL2Q9H841 368 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 PALMDQ9NP74 551 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 AKIP1Q9NQ31 210 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 DECR2Q9NUI1 292 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 PARPBPQ9NWS1 579 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 LIPGQ9Y5X9 500 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 DNAJC13O75165 2243 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 ZNF407Q9C0G0 2248 aa7.64□□□□□ -1.19
TPM3-213ENST00000368545 TLN1Q9Y490 2541 aaKnown RBP7.63□□□□□ -1.19
TPM3-213ENST00000368545 TRAV1-2A0A0B4J238 106 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 ZNF724A8MTY0 619 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 UCHL1P09936 223 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 H2BFMP0C1H6 154 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 FCGR2AP12318 317 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 NPR2P20594 1047 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 BMXP51813 675 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 RPS11P62280 158 aaKnown RBP eCLIP7.63□□□□□ -1.19
TPM3-213ENST00000368545 MRPS34P82930 218 aaKnown RBP7.63□□□□□ -1.19
TPM3-213ENST00000368545 INSL4Q14641 139 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 STK11Q15831 433 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 INAQ16352 499 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 OR7E24Q6IFN5 339 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 UNQ9370/PRO34162Q6UXP9 181 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 LINC00346Q8IVM7 164 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 ZNF676Q8N7Q3 588 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 ABHD3Q8WU67 409 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 HSD17B8Q92506 261 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 SLAMF6Q96DU3 332 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 PRRG4Q9BZD6 226 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 BARHL1Q9BZE3 327 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 DEFB127Q9H1M4 99 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 TPK1Q9H3S4 243 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 MOB1AQ9H8S9 216 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 UGT2A1Q9Y4X1 527 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 LHFPL6Q9Y693 200 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms