RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NUFIP2Q7Z417 695 aaKnown RBP10.57□□□□□ -0.72
USF1-203ENST00000368021 LRRC18Q8N456 261 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 OR5M9Q8NGP3 310 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 GPR148Q8TDV2 347 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 FBXO17Q96EF6 278 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 TRIB1Q96RU8 372 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 ATF6BQ99941 703 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 BARHL1Q9BZE3 327 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 FAM206AQ9NX38 181 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 TBC1D24Q9ULP9 559 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 DOCK7Q96N67 2140 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 TMEM82A0PJX8 343 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 PEX14O75381 377 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 SMIM6P0DI80 62 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 GABRA1P14867 456 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 HSD11B1P28845 292 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 OR3A2P47893 321 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 BTG1P62324 171 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 TAF13Q15543 124 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 FAM27D1Q5T7N8 215 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 FBXW9Q5XUX1 488 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 NSUN5P2Q63ZY6 315 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 PGAP1Q75T13 922 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 FAM214BQ7L5A3 538 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 FGD2Q7Z6J4 655 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 DUSP18Q8NEJ0 188 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 PRR7Q8TB68 274 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 FBXW5Q969U6 566 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 DERL3Q96Q80 235 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 OR52A1Q9UKL2 312 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 ARHGAP21Q5T5U3 1957 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 WDR1O75083 606 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 CNOT4O95628 575 aaKnown RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 UBCP0CG48 685 aaKnown RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 OTX1P32242 354 aaPredicted RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 RRAS2P62070 204 aaPredicted RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 ECH1Q13011 328 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 HNRNPA0Q13151 305 aaKnown RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 RAB35Q15286 201 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 FAM209BQ5JX69 171 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 ELFN2Q5R3F8 820 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 METAP1DQ6UB28 335 aaPredicted RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 ZNF813Q6ZN06 617 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 OR8H3Q8N146 312 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 OR52H1Q8NGJ2 320 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 AP3S1Q92572 193 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 CREB3L1Q96BA8 519 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 KCNJ15Q99712 375 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 HDHD2Q9H0R4 259 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 NUFIP1Q9UHK0 495 aaKnown RBP10.56□□□□□ -0.72
USF1-203ENST00000368021 SLC22A13Q9Y226 551 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 SLC5A6Q9Y289 635 aa10.56□□□□□ -0.72
USF1-203ENST00000368021 TRAV6A0A075B6T7 132 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 A0A1B0GVI7 797 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 MBD3L4A6NDZ8 208 aaPredicted RBP10.55□□□□□ -0.72
USF1-203ENST00000368021 MBD3L3A6NE82 208 aaPredicted RBP10.55□□□□□ -0.72
USF1-203ENST00000368021 MBD3L5A6NJ08 208 aaPredicted RBP10.55□□□□□ -0.72
USF1-203ENST00000368021 ACOD1A6NK06 481 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 MPTX1A8MV57 137 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 SGCEO43556 437 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 S100A9P06702 114 aaKnown RBP10.55□□□□□ -0.72
USF1-203ENST00000368021 CLEC2LP0C7M8 214 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 ACHEP22303 614 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 MEOX2P50222 304 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 CD83Q01151 205 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 BCL2L15Q5TBC7 163 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 TMEM244Q5VVB8 128 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 SLC16A14Q7RTX9 510 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 C9orf62Q8N4C0 152 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 OR4M2Q8NGB6 313 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 MBD3L2Q8NHZ7 208 aaPredicted RBP10.55□□□□□ -0.72
USF1-203ENST00000368021 GSX2Q9BZM3 304 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 NOX4Q9NPH5 578 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 PLEK2Q9NYT0 353 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 PLEKHB1Q9UF11 243 aaPredicted RBP10.55□□□□□ -0.72
USF1-203ENST00000368021 GTF2A1LQ9UNN4 478 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 TIMM10BQ9Y5J6 103 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 RTTNQ86VV8 2226 aa10.55□□□□□ -0.72
USF1-203ENST00000368021 TRBV5-7A0A0A0MS05 114 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 hCG_1807616A0A1W2PRN6 198 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 FIGNL2A6NMB9 653 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 H7C2Y5 167 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 PIN1P1O15428 100 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 SYNGR3O43761 229 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 SRMP19623 302 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 MPGP29372 298 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 TDGF1P3P51864 188 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ARF1P84077 181 aaKnown RBP10.54□□□□□ -0.72
USF1-203ENST00000368021 GFRALQ6UXV0 394 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 SKA3Q8IX90 412 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 DTX3Q8N9I9 347 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 C9orf106Q8NAJ2 232 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 OR51A4Q8NGJ6 313 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 TMEM106AQ96A25 262 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms