RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PDCD10Q9BUL8 212 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 NUDT9Q9BW91 350 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 SEC11CQ9BY50 192 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 TINAGL1Q9GZM7 467 aaPredicted RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 TXNIPQ9H3M7 391 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 IFT22Q9H7X7 185 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 MMP26Q9NRE1 261 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 ZNF629Q9UEG4 869 aaPredicted RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 ATPIF1Q9UII2 106 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 TCFL5Q9UL49 500 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 DTX4Q9Y2E6 619 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 RHBDD3Q9Y3P4 386 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 MMACHCQ9Y4U1 282 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 R4GMQ9 66 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 PRSS37A4D1T9 235 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 ZNF98A6NK75 572 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 FAM171A2A8MVW0 826 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 TGFBR3LH3BV60 316 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 BPNT1O95861 308 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 CRHP06850 196 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 PVRP15151 417 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 HPGDP15428 266 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 CRABP1P29762 137 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 CBX5P45973 191 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 ADAM8P78325 824 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 PCK2Q16822 640 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 GXYLT1Q4G148 440 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 PRR30Q53SZ7 412 aaPredicted RBP10.22□□□□□ -0.77
USF1-201ENST00000368019 FAM69BQ5VUD6 431 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 ZNF385CQ66K41 422 aaPredicted RBP10.22□□□□□ -0.77
USF1-201ENST00000368019 ARMC6Q6NXE6 501 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 RBMXL3Q8N7X1 1067 aaKnown RBP10.22□□□□□ -0.77
USF1-201ENST00000368019 FDCSPQ8NFU4 85 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 DMBX1Q8NFW5 382 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 OR1M1Q8NGA1 313 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 OR51A4Q8NGJ6 313 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 OR9A4Q8NGU2 314 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 OR52N5Q8NH56 324 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 OR1L3Q8NH93 324 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 RNF141Q8WVD5 230 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 PPP1R1CQ8WVI7 109 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 FAM46BQ96A09 425 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 ARSGQ96EG1 525 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 SAT2Q96F10 170 aaPredicted RBP10.22□□□□□ -0.77
USF1-201ENST00000368019 SCGB3A2Q96PL1 93 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 UQCC2Q9BRT2 126 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 WDR13Q9H1Z4 485 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 SYT4Q9H2B2 425 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 KCNG2Q9UJ96 466 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 MKL2Q9ULH7 1088 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 PCDHB10Q9UN67 800 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 VSIG4Q9Y279 399 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 POMT1Q9Y6A1 747 aa10.22□□□□□ -0.77
USF1-201ENST00000368019 HEATR5AQ86XA9 2040 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 DIDO1Q9BTC0 2240 aaKnown RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 A0A1B0GTH9 108 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 WIPF3A6NGB9 483 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 A6NIZ1 184 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 OR2AT4A6NND4 320 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 H0YIG0 161 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 ALOX12BO75342 701 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 SLC25A12O75746 678 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 OR6A2O95222 327 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 F13BP05160 661 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 FOLR2P14207 255 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 ST6GAL1P15907 406 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 BDKRB2P30411 391 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 DNASE1L1P49184 302 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 NR0B1P51843 470 aaKnown RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 RAP1BP61224 184 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 RAP1AP62834 184 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 MELKQ14680 651 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 CD226Q15762 336 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 GUCA2BQ16661 112 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 HAGHLQ6PII5 290 aaPredicted RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 ZNF627Q7L945 461 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 C19orf47Q8N9M1 422 aaKnown RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 OR4K17Q8NGC6 315 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 OR5AP2Q8NGF4 316 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 OR1S2Q8NGQ3 325 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 OR8S1Q8NH09 359 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 PHOSPHO1Q8TCT1 267 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 METTL21AQ8WXB1 218 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 DVL3Q92997 716 aaPredicted RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 SLC25A44Q96H78 314 aaPredicted RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 AMELYQ99218 206 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 SLC6A7Q99884 636 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 CHRNA10Q9GZZ6 450 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 MRPL22Q9NWU5 206 aaKnown RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 SOHLH2Q9NX45 425 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 TAS2R4Q9NYW5 299 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 DNAJB11Q9UBS4 358 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 MLXQ9UH92 298 aa10.21□□□□□ -0.77
USF1-201ENST00000368019 GDF2Q9UK05 429 aaPredicted RBP10.21□□□□□ -0.77
USF1-201ENST00000368019 ZGRF1Q86YA3 2104 aa10.21□□□□□ -0.78
USF1-201ENST00000368019 TMEM150CB9EJG8 249 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 F5H0A9 414 aaPredicted RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 H3BMH7 237 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 RAB27BO00194 218 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms