RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SLC30A7Q8NEW0 376 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 MCHR2Q969V1 340 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 FN3KRPQ9HA64 309 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 MEX3AA1L020 520 aaKnown RBP16.65■□□□□ 0.26
CLIP2-202ENST00000361545 SUB1P53999 127 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLIP2-202ENST00000361545 DERL3Q96Q80 235 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF391Q9UJN7 358 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF266Q14584 549 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 PABPC1L2AQ5JQF8 200 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 PRSS42Q7Z5A4 293 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 M1APQ8TC57 530 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 ZDHHC16Q969W1 377 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 AP1S3Q96PC3 154 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF385DQ9H6B1 395 aa16.64■□□□□ 0.26
CLIP2-202ENST00000361545 SPTA1P02549 2419 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 TMIGD3P0DMS9 266 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-202ENST00000361545 ATF1P18846 271 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 PDCD1Q15116 288 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 CDC20BQ86Y33 519 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 SLC35B4Q969S0 331 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 RNF32Q9H0A6 362 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 ISYNA1Q9NPH2 558 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 BIN3Q9NQY0 253 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 SIRT3Q9NTG7 399 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-202ENST00000361545 OR5H8P0DN80 308 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 ARV1Q9H2C2 271 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 HRKO00198 91 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 UBE2IP63279 158 aaKnown RBP16.64■□□□□ 0.25
CLIP2-202ENST00000361545 C11orf91Q3C1V1 193 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 PRR7Q8TB68 274 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 TSPAN32Q96QS1 320 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 PRDM6Q9NQX0 595 aa16.64■□□□□ 0.25
CLIP2-202ENST00000361545 HRH1P35367 487 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 MAGEA5P43359 124 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 ELLP55199 621 aaPredicted RBP16.63■□□□□ 0.25
CLIP2-202ENST00000361545 PINX1Q96BK5 328 aaKnown RBP16.63■□□□□ 0.25
CLIP2-202ENST00000361545 TRMT61AQ96FX7 289 aaKnown RBP16.63■□□□□ 0.25
CLIP2-202ENST00000361545 PUS1Q9Y606 427 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLIP2-202ENST00000361545 CA6P23280 308 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 GPNMBQ14956 572 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 FAM109AQ8N4B1 249 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 UBALD1Q8TB05 177 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 NUBPLQ8TB37 319 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 RGPD4Q7Z3J3 1758 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 TRIP11Q15643 1979 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 SULT1C2O00338 296 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 CMTM2Q8TAZ6 248 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 OPA3Q9H6K4 179 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 OR6C68A6NDL8 312 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 ST8SIA3O43173 380 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 CD1EP15812 388 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 THBS3P49746 956 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 OR10R2Q8NGX6 335 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 DOCK5Q9H7D0 1870 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 SERTM1A2A2V5 107 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 SLC25A35Q3KQZ1 300 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 OR5H6Q8NGV6 325 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 NANPQ8TBE9 248 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 MOGAT1Q96PD6 335 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 TPPP3Q9BW30 176 aa16.63■□□□□ 0.25
CLIP2-202ENST00000361545 OR2M5A3KFT3 312 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 NDUFB3O43676 98 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 CD3DP04234 171 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 THBS4P35443 961 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 FOXL2P58012 376 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 ZNF141Q15928 474 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 SPANXN5Q5MJ07 72 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 SLC35E1Q96K37 410 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 EXOSC3Q9NQT5 275 aaKnown RBP16.62■□□□□ 0.25
CLIP2-202ENST00000361545 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 C21orf140B9A014 251 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 GALR2O43603 387 aaPredicted RBP16.62■□□□□ 0.25
CLIP2-202ENST00000361545 GON7Q9BXV9 100 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 PLEKHB1Q9UF11 243 aaPredicted RBP16.62■□□□□ 0.25
CLIP2-202ENST00000361545 UBE2MP61081 183 aaKnown RBP16.62■□□□□ 0.25
CLIP2-202ENST00000361545 TPBGQ13641 420 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 CD226Q15762 336 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 TMEM200CA6NKL6 621 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 TIAL1Q01085 375 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLIP2-202ENST00000361545 LRRC10Q5BKY1 277 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 C12orf73Q69YU5 71 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 BTLAQ7Z6A9 289 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 PP6455Q8WZ26 134 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 CCL17Q92583 94 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 COMMD5Q9GZQ3 224 aa16.62■□□□□ 0.25
CLIP2-202ENST00000361545 A0A1W2PPV9 198 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 PTBP1P26599 531 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLIP2-202ENST00000361545 TMEM268Q5VZI3 342 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 TMEM108Q6UXF1 575 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 PLXNB2O15031 1838 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 TRGV10A0A0A0MS01 117 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 SCAF4O95104 1147 aaKnown RBP16.61■□□□□ 0.25
CLIP2-202ENST00000361545 RFX2P48378 723 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 TMEM211Q6ICI0 200 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 DRAM2Q6UX65 266 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 Q6ZRG5 221 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 UBE3DQ7Z6J8 389 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms