RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MOGAT1Q96PD6 335 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 FIZ1Q96SL8 496 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DDOQ99489 341 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 B3GALT5Q9Y2C3 310 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 TMSB15BA0A087X1C1 80 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ZNF727A8MUV8 499 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 TYROBPO43914 113 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 FCGR3BO75015 233 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 LY6EQ16553 131 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 GSG1Q2KHT4 349 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 OR2G6Q5TZ20 316 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 MYPOPQ86VE0 399 aaPredicted RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 TMEM255BQ8WV15 326 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 PIK3IP1Q96FE7 263 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 GHITMQ9H3K2 345 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 C6orf106Q9H6K1 298 aaPredicted RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 FSCN3Q9NQT6 498 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 SIRT3Q9NTG7 399 aaPredicted RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 FAM87AP0C7U9 286 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ZBTB25P24278 435 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 CCR7P32248 378 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 HNRNPA1L2Q32P51 320 aaKnown RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 TIFABQ6ZNK6 161 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ZNF441Q8N8Z8 693 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 DUX5Q96PT3 197 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 PRR14Q9BWN1 585 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 DLL4Q9NR61 685 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 CDRT15L2A8MXV6 281 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 TMPRSS2O15393 492 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 AQP8O94778 261 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 GPANK1O95872 356 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 CD3EP07766 207 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ADRA1AP35348 466 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 GABARAPL2P60520 117 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 SMIM21Q3B7S5 101 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 RELL2Q8NC24 303 aaPredicted RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 OR13J1Q8NGT2 312 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ZNF346Q9UL40 294 aaKnown RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 DNAJC15Q9Y5T4 150 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ACTL6AO96019 429 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 MT-CO3P00414 261 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ID1P41134 155 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 TMEM211Q6ICI0 200 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 OLIG3Q7RTU3 272 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 PXT1Q8NFP0 134 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 RXFP4Q8TDU9 374 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 UBR2Q8IWV8 1755 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 TRGV5A0A0B4J1U4 118 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ALOX5APP20292 161 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 CAMPP49913 170 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ATP4BP51164 291 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 SNRPGP62308 76 aaKnown RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 RPL24P83731 157 aaKnown RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 PRSS45Q7RTY3 260 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 OR1L1Q8NH94 360 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 AKR7LQ8NHP1 331 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 C1QTNF3Q9BXJ4 246 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 KLF16Q9BXK1 252 aaPredicted RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 MAGIXQ9H6Y5 334 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 C20orf141Q9NUB4 165 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ZNF256Q9Y2P7 627 aaPredicted RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 LSM2Q9Y333 95 aaKnown RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 LOC285095A0A1B0GVY8 99 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 FAM24AA6NFZ4 105 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 H0Y8X5 98 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 H3BP45 60 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 CACNG3O60359 315 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 TNFRSF1AP19438 455 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ACHEP22303 614 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 COTL1Q14019 142 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 LEXMQ3ZCV2 418 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 C1orf140Q5VVS0 124 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ACSM5Q6NUN0 579 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 ISCA2Q86U28 154 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 SLC39A11Q8N1S5 342 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 MRPL43Q8N983 215 aaKnown RBP8.85□□□□□ -0.99
CHD3-202ENST00000358181 KLHDC9Q8NEP7 349 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 BIRC8Q96P09 236 aa8.85□□□□□ -0.99
CHD3-202ENST00000358181 DHRS7CA6NNS2 312 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ZNF623O75123 536 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 CCL2P13500 99 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 HIST1H1TP22492 207 aaPredicted RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 LIPAP38571 399 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 RACK1P63244 317 aaKnown RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 RBMS2Q15434 407 aaKnown RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 RFPL4BQ6ZWI9 263 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SPNS2Q8IVW8 549 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 MED30Q96HR3 178 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SEMA4GQ9NTN9 838 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ADAMTS5Q9UNA0 930 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 RFPL4AA6NLU0 287 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 RFPL4AL1F8VTS6 287 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 CCL21O00585 134 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 IGKV3-20P01619 116 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 IGFBP6P24592 240 aaPredicted RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 CDAP32320 146 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 CCR6P51684 374 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SHHQ15465 462 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 COL5A1-AS1Q5SY13 56 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ZNF480Q8WV37 535 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms