RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SELENOVP59797 346 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 BDH1Q02338 343 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 OR8B8Q15620 311 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 UBE2UQ5VVX9 321 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 DTX2Q86UW9 622 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 PLPP7Q8NBV4 271 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 OR56B2PQ8NGI1 322 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 OR51A4Q8NGJ6 313 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 GHSRQ92847 366 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 OPALINQ96PE5 141 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 MGLLQ99685 303 aa12.71□□□□□ -0.37
CCNE1-202ENST00000357943 RAI1Q7Z5J4 1906 aaPredicted RBP12.71□□□□□ -0.38
CCNE1-202ENST00000357943 AKAP6Q13023 2319 aa12.71□□□□□ -0.38
CCNE1-202ENST00000357943 LOC107986453A0A1B0GWG9 222 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 GGT3PA6NGU5 568 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 TMEM212A6NML5 194 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 IQCF6A8MYZ5 107 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 SYT7O43581 403 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 PLPP2O43688 288 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 CCL1P22362 96 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 MMP15P51511 669 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 MLLT11Q13015 90 aaPredicted RBP12.7□□□□□ -0.38
CCNE1-202ENST00000357943 AGAP6Q5VW22 663 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 C11orf71Q6IPW1 123 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 RGP1Q92546 391 aaPredicted RBP12.7□□□□□ -0.38
CCNE1-202ENST00000357943 GTF3AQ92664 365 aaKnown RBP12.7□□□□□ -0.38
CCNE1-202ENST00000357943 TMIGD2Q96BF3 282 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 TRAF4Q9BUZ4 470 aaPredicted RBP12.7□□□□□ -0.38
CCNE1-202ENST00000357943 FAM192AQ9GZU8 254 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 COMMD4Q9H0A8 199 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 CBLN4Q9NTU7 201 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 NDUFA13Q9P0J0 144 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 A0A1B0GVI7 797 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 A6NIN4 97 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 LMX1BO60663 402 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 DHRS3O75911 302 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 INMTO95050 263 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 MAGEB1P43366 347 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 NEDD8Q15843 81 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 NKPD1Q17RQ9 610 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 FOXB2Q5VYV0 432 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 Q6ZSR3 168 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 DOK3Q7L591 496 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 ZCCHC24Q8N2G6 241 aaKnown RBP12.7□□□□□ -0.38
CCNE1-202ENST00000357943 OR13C5Q8NGS8 318 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 MSL2Q9HCI7 577 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 VCX3AQ9NNX9 186 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 ISYNA1Q9NPH2 558 aa12.7□□□□□ -0.38
CCNE1-202ENST00000357943 SMIM31A0A1B0GVY4 71 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 LOC390937A0A1W2PQ73 354 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 MTRF1O75570 445 aaKnown RBP12.69□□□□□ -0.38
CCNE1-202ENST00000357943 NAT2P11245 290 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 SELEP16581 610 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 ACHEP22303 614 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 PSMB9P28065 219 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 TPBGQ13641 420 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 ARMCX4Q5H9R4 360 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 Q6ZR03 302 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 SEMA6DQ8NFY4 1073 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 UFD1Q92890 307 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 PPP1R3EQ9H7J1 279 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 HHLA2Q9UM44 414 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 ZNF281Q9Y2X9 895 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 V9GYS6 101 aa12.69□□□□□ -0.38
CCNE1-202ENST00000357943 SPG11Q96JI7 2443 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 ZSCAN5BA6NJL1 495 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 M0R233 179 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 FAHP16930 419 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 DDOSTP39656 456 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 MAP2K3P46734 347 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCNE1-202ENST00000357943 SNRPD2P62316 118 aaKnown RBP12.68□□□□□ -0.38
CCNE1-202ENST00000357943 TSTQ16762 297 aaKnown RBP12.68□□□□□ -0.38
CCNE1-202ENST00000357943 PHC2Q8IXK0 858 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 IGFBPL1Q8WX77 278 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 MUL1Q969V5 352 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 PIGLQ9Y2B2 252 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 RHBDD3Q9Y3P4 386 aa12.68□□□□□ -0.38
CCNE1-202ENST00000357943 PLSCR5A0PG75 271 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 HLA-DPB1P04440 258 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 CD1AP06126 327 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 CPEP16870 476 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 CA6P23280 308 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 CDKN1AP38936 164 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 RIPPLY1Q0D2K3 151 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 GPR50Q13585 617 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 SSX1Q16384 188 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 MOGQ16653 247 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 GPR141Q7Z602 305 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-202ENST00000357943 CCL19Q99731 98 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 SLC30A2Q9BRI3 323 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms