RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ARSBP15848 533 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ALOX5APP20292 161 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 CBX5P45973 191 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 PITPNBP48739 271 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 GPM6AP51674 278 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ASCC1Q8N9N2 400 aaKnown RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 PTPRBP23467 1997 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 DHRS7CA6NNS2 312 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ACSM4P0C7M7 580 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ZNF93P35789 620 aaPredicted RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 SNTB1Q13884 538 aaKnown RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 CDONQ4KMG0 1287 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 SPANXN2Q5MJ10 180 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ELMOD2Q8IZ81 293 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 OR5A2Q8NGI9 324 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 OR4D6Q8NGJ1 314 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 HAVCR1Q96D42 359 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 MRPL13Q9BYD1 178 aaKnown RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 OR2J1Q9GZK6 312 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 RAMP1O60894 148 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 CLUP10909 449 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 DAOP14920 347 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 GNB2P62879 340 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 COMTD1Q86VU5 262 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 OR13C9Q8NGT0 318 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ZNF696Q9H7X3 374 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 RSL24D1Q9UHA3 163 aaKnown RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 STEAP1Q9UHE8 339 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 FAM96BQ9Y3D0 163 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 AMMECR1Q9Y4X0 333 aaPredicted RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 SSX4O60224 188 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 MPZL1O95297 269 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 PNPP00491 289 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 TFP02787 698 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 CRYBA1P05813 215 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 SERPINA2P20848 420 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 OPRL1P41146 370 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 OR3A3P47888 321 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 MOGAT3Q86VF5 341 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 CATSPERDQ86XM0 798 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ZNF565Q8N9K5 539 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 OR10Z1Q8NGY1 313 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 KLF14Q8TD94 323 aaPredicted RBP7.97□□□□□ -1.13
UPF2-202ENST00000357604 GINS4Q9BRT9 223 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 ATG5Q9H1Y0 275 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 PALMDQ9NP74 551 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 PEX16Q9Y5Y5 336 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 MAP2K4P45985 399 aa7.96□□□□□ -1.13
UPF2-202ENST00000357604 HAAOP46952 286 aa7.96□□□□□ -1.13
UPF2-202ENST00000357604 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.13
UPF2-202ENST00000357604 TMEM203Q969S6 136 aa7.96□□□□□ -1.13
UPF2-202ENST00000357604 CDCA4Q9BXL8 241 aa7.96□□□□□ -1.13
UPF2-202ENST00000357604 TMEFF2Q9UIK5 374 aaPredicted RBP7.96□□□□□ -1.13
UPF2-202ENST00000357604 ATG12O94817 140 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 CLIC3O95833 236 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 IFNA2P01563 188 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 SCG5P05408 212 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 GTF2F2P13984 249 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 SPOCK1Q08629 439 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 CEP78Q5JTW2 689 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 CYB5R2Q6BCY4 276 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 MRPL41Q8IXM3 137 aaKnown RBP7.96□□□□□ -1.14
UPF2-202ENST00000357604 OR8B12Q8NGG6 310 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 OR6M1Q8NGM8 313 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 ST8SIA4Q92187 359 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 DDX28Q9NUL7 540 aaKnown RBP7.96□□□□□ -1.14
UPF2-202ENST00000357604 PLEKHJ1Q9NW61 149 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 V9GY05 133 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 ALDOBP05062 364 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 FPR2P25090 351 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 ART1P52961 327 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 CHRFAM7AQ494W8 412 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 RNLSQ5VYX0 342 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 C16orf87Q6PH81 154 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 SPNS3Q6ZMD2 512 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 OR2G2Q8NGZ5 317 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 GAL3ST2Q9H3Q3 398 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 ONECUT1Q9UBC0 465 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 TRIM64BA6NI03 449 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 CDC14BO60729 498 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 ZNF26P17031 533 aaPredicted RBP7.96□□□□□ -1.14
UPF2-202ENST00000357604 HTR2CP28335 458 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 HERV-K104P61576 105 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 GPR107Q5VW38 600 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 FOXL2NBQ6ZUU3 175 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 NCCRP1Q6ZVX7 275 aaPredicted RBP7.96□□□□□ -1.14
UPF2-202ENST00000357604 ADGRE4PQ86SQ3 457 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 IZUMO1Q8IYV9 350 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 SMIM19Q96E16 107 aa7.96□□□□□ -1.14
UPF2-202ENST00000357604 A0A075B6Q4 140 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 MTNR1BP49286 362 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 NPY4RP50391 375 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 ENDOGQ14249 297 aaKnown RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 AADACL4Q5VUY2 407 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 CDH26Q8IXH8 852 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 WFDC6Q9BQY6 131 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 CDRT1O95170 752 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 DIRAS3O95661 229 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 GPANK1O95872 356 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms