RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 GPR85P60893 370 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 NAAAQ02083 359 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 ROM1Q03395 351 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 RPL18Q07020 188 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 AIMP2Q13155 320 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 MEF2DQ14814 521 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 LYPD6Q86Y78 171 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 BPIFB2Q8N4F0 458 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 KCNE4Q8WWG9 221 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 NARS2Q96I59 477 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 FER1L6-AS2Q96M78 137 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 SLC6A7Q99884 636 aa11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 USB1Q9BQ65 265 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 ESRP2Q9H6T0 727 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-202ENST00000357348 TRBV6-7A0A0A0MS04 114 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 A0A1W2PQD3 144 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 SHISA8B8ZZ34 492 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 EFSO43281 561 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 HTR2CP28335 458 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 TACR3P29371 465 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 PTGDSP41222 190 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 TAF13Q15543 124 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 PNLIPRP3Q17RR3 467 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 DEFB109BQ30KR1 87 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 ABHD17BQ5VST6 288 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 C3orf33Q6P1S2 294 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 PAQR4Q8N4S7 273 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 SLC30A7Q8NEW0 376 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 OR5AP2Q8NGF4 316 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 MRGPRFQ96AM1 343 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 PIK3IP1Q96FE7 263 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 ELOVL3Q9HB03 270 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 PPP4R1LQ9P1A2 415 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF629Q9UEG4 869 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 MLXQ9UH92 298 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 WASF3Q9UPY6 502 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 NOP16Q9Y3C1 178 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 RHBDD3Q9Y3P4 386 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 NCOR2Q9Y618 2525 aa11.22□□□□□ -0.61
RTFDC1-202ENST00000357348 TP53I11O14683 189 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 CYB5AP00167 134 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 HLA-AP01891 365 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 F13BP05160 661 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 HEXAP06865 529 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 PMPCAQ10713 525 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 C1orf100Q5SVJ3 147 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 H3F3CQ6NXT2 135 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 HAGHLQ6PII5 290 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 LRRC69Q6ZNQ3 347 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 ADGRE4PQ86SQ3 457 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF679Q8IYX0 411 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 ASB5Q8WWX0 329 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 AQP3Q92482 292 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 PRRT1Q99946 306 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 LAT2Q9GZY6 243 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 BIN3Q9NQY0 253 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 KCNG2Q9UJ96 466 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 WIF1Q9Y5W5 379 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 NCKAP5O14513 1909 aa11.21□□□□□ -0.61
RTFDC1-202ENST00000357348 ANKRD11Q6UB99 2663 aaPredicted RBP11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 C9orf170A2RU37 121 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 H7C1C5 153 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 PNPP00491 289 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 RPS27P42677 84 aaKnown RBP11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 DNASE1L1P49184 302 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 CYB561P49447 251 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 CAPZA1P52907 286 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 LCN6P62502 163 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 MEP1BQ16820 701 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 OR1M1Q8NGA1 313 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 C12orf57Q99622 126 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 PDCD10Q9BUL8 212 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 LRFN1Q9P244 771 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 SLC22A13Q9Y226 551 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 CHD8Q9HCK8 2581 aa11.21□□□□□ -0.62
RTFDC1-202ENST00000357348 A0A0G2JMM0 328 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 TEX13DA0A0J9YY54 714 aaPredicted RBP11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 A0A1W2PPB8 328 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 A0A1W2PRS3 328 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 MEGF11A6BM72 1044 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 DBX1A6NMT0 343 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 KIR3DP1A8MWS1 328 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 CCSO14618 274 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 ACTL6AO96019 429 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 RAB6AP20340 208 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 FOXK1P85037 733 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 ODF4Q2M2E3 257 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 CATSPERDQ86XM0 798 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 PLPP7Q8NBV4 271 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 THAP6Q8TBB0 222 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 KTI12Q96EK9 354 aaPredicted RBP11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 GNRHR2Q96P88 292 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 SIGLEC12Q96PQ1 595 aa11.2□□□□□ -0.62
RTFDC1-202ENST00000357348 PTDSS2Q9BVG9 487 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms