RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PPP5CP53041 499 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 RAB1AP62820 205 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 KCNMB1Q16558 191 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 ACSM3Q53FZ2 586 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 DEGS2Q6QHC5 323 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 UNQ9370/PRO34162Q6UXP9 181 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 CEACAM19Q7Z692 300 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 THRSPQ92748 146 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 RNF166Q96A37 237 aaPredicted RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 DCLRE1CQ96SD1 692 aaKnown RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 MROQ9BYG7 248 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 TTTY10Q9BZA0 68 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 MYOZ1Q9NP98 299 aaPredicted RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 FBXO9Q9UK97 447 aaPredicted RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 IKZF2Q9UKS7 526 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 CMAHPQ9Y471 501 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 SPEF1Q9Y4P9 236 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 SONP18583 2426 aaKnown RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 A0A096LNT2 108 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 NDUFS8O00217 210 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 MAGEB4O15481 346 aaPredicted RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 TMEM127O75204 238 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 GPANK1O95872 356 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 SPARCP09486 303 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 PATE4P0C8F1 98 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 CCR9P51686 369 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 RPS11P62280 158 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 FMODQ06828 376 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 HNRNPA0Q13151 305 aaKnown RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 ZMAT1Q5H9K5 638 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 C16orf87Q6PH81 154 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 CCDC190Q86UF4 302 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 ACOT12Q8WYK0 555 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 TMEM54Q969K7 222 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
CDRT1-202ENST00000354433 TPK1Q9H3S4 243 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 RNF121Q9H920 327 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 SLCO1C1Q9NYB5 712 aa9.92□□□□□ -0.82
CDRT1-202ENST00000354433 HEATR1Q9H583 2144 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 LOC390937A0A1W2PQ73 354 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ANKRD61A6NGH8 418 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 TMEM212A6NML5 194 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ZNF879B4DU55 563 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 DHHO43323 396 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 QDPRP09417 244 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 UCHL1P09936 223 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 CLEC2LP0C7M8 214 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ZNF14P17017 642 aaPredicted RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 CR1P17927 2039 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 MAPK3P27361 379 aaPredicted RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 DCTDP32321 178 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 PSMB10P40306 273 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ZNF84P51523 738 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 RIDAP52758 137 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 NANOS3P60323 173 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 RPS23P62266 143 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 MXD1Q05195 221 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ANK3Q12955 4377 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 EIF2B1Q14232 305 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 MEP1BQ16820 701 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 SPANXN2Q5MJ10 180 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 MZT2AQ6P582 158 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 RHOUQ7L0Q8 258 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ZNF627Q7L945 461 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 KRT77Q7Z794 578 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 SKA3Q8IX90 412 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ZCCHC24Q8N2G6 241 aaKnown RBP9.91□□□□□ -0.82
CDRT1-202ENST00000354433 SLC22A24Q8N4F4 322 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 OR2G2Q8NGZ5 317 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 OR5AK2Q8NH90 309 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 NSMAFQ92636 917 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 MCHR2Q969V1 340 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 MAP6Q96JE9 813 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 CEP19Q96LK0 163 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 SH3GL3Q99963 347 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ABHD6Q9BV23 337 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 BPESC1Q9GZL8 116 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 COMMD4Q9H0A8 199 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 CHODLQ9H9P2 273 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ELOVL3Q9HB03 270 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 TMEM38BQ9NVV0 291 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 B3GNT2Q9NY97 397 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 ZNF224Q9NZL3 707 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 FBXL3Q9UKT7 428 aa9.91□□□□□ -0.82
CDRT1-202ENST00000354433 IGKV1D-43A0A0B4J1Z2 117 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 OR4C45A6NMZ5 311 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 LOC110117498-PIK3R3F6TDL0 507 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 M0R233 179 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 ZFPL1O95159 310 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 PSKH1P11801 424 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 DAOP14920 347 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 ZNF12P17014 697 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 NR4A2P43354 598 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 INSL4Q14641 139 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 SLC36A2Q495M3 483 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 DDI2Q5TDH0 399 aa9.9□□□□□ -0.82
CDRT1-202ENST00000354433 CYB5R2Q6BCY4 276 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms