RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DUX4L7P0CJ90 424 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 SLC25A4P12235 298 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 GP1BBP13224 206 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 LIFP15018 202 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 PRKACAP17612 351 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 KLK2P20151 261 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 SLC6A8P48029 635 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 SSR4P51571 173 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 RIDAP52758 137 aaKnown RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 RPL27P61353 136 aaKnown RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 EIF2B1Q14232 305 aaKnown RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 PLPPR5Q32ZL2 321 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 SLC22A6Q4U2R8 563 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 ACER2Q5QJU3 275 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 PDSS1Q5T2R2 415 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 LPCAT3Q6P1A2 487 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 KDM8Q8N371 416 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 JAGN1Q8N5M9 183 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 IL22RA1Q8N6P7 574 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 ACBD4Q8NC06 268 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 TMEM185AQ8NFB2 350 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 NARS2Q96I59 477 aaKnown RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 THOC3Q96J01 351 aaKnown RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF587Q96SQ5 575 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 NKX6-2Q9C056 277 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-204ENST00000353317 SLCO5A1Q9H2Y9 848 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 PPP4R1LQ9P1A2 415 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 DUX4Q9UBX2 424 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 PLEKHA6Q9Y2H5 1048 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 CACNA1GO43497 2377 aa7.61□□□□□ -1.19
TRIM55-204ENST00000353317 TRAV36DV7A0A075B6V5 113 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 IGLV3-32A0A0A0MS00 114 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PINLYPA6NC86 204 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SLC25A12O75746 678 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 IGHEP01854 428 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 CEACAM1P13688 526 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 FSTP19883 344 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 RAB3AP20336 220 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ZBTB25P24278 435 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PPIAP62937 165 aaKnown RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PPP1R1AQ13522 171 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SNTB1Q13884 538 aaKnown RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PAN3Q58A45 887 aaKnown RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 DCAF10Q5QP82 559 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 KCTD18Q6PI47 426 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ACOT7LQ6ZUV0 252 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 RHOUQ7L0Q8 258 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 GRINAQ7Z429 371 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 TMEM17Q86X19 198 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 GVQW1Q8N7I0 195 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 FADS6Q8N9I5 356 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 OR4D6Q8NGJ1 314 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PAQR8Q8TEZ7 354 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 FAM117AQ9C073 453 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 CST11Q9H112 138 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SLC6A15Q9H2J7 730 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 COMMD9Q9P000 198 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ACACAQ13085 2346 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 FTCDNL1E5RQL4 147 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ABCD4O14678 606 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 NKX2-8O15522 239 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SRSF10O75494 262 aaKnown RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SERPINA7P05543 415 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 RFPL3SP0C7P2 107 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 DNASE1L1P49184 302 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 POLR2HP52434 150 aaKnown RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 AKR1C2P52895 323 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 CXADRP78310 365 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 AKR1C1Q04828 323 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SGCBQ16585 318 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 CDNFQ49AH0 187 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PABPC1L2AQ5JQF8 200 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SPINK14Q6IE38 97 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 OR52W1Q6IF63 320 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 TMPRSS7Q7RTY8 843 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 MAMDC2Q7Z304 686 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SLC25A42Q86VD7 318 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 LYPD6Q86Y78 171 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF584Q8IVC4 421 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 TMEM156Q8N614 296 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 OR13C3Q8NGS6 347 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 OR52N5Q8NH56 324 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 CMBLQ96DG6 245 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PHYHIPLQ96FC7 376 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 SIGLEC12Q96PQ1 595 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ANGPTL4Q9BY76 406 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 HES7Q9BYE0 225 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 VSX1Q9NZR4 365 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 PCDHB10Q9UN67 800 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 RHBDD3Q9Y3P4 386 aa7.6□□□□□ -1.19
TRIM55-204ENST00000353317 ANKRD11Q6UB99 2663 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-204ENST00000353317 KIAA1549Q9HCM3 1950 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ARPC4-TTLL3A0A0A6YYG9 625 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 FAM25EA8MYX2 175 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 H3BML4 177 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 RAB27BO00194 218 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ETV2O00321 342 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ZIC3O60481 467 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms