RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PRRX2Q99811 253 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 MESP1Q9BRJ9 268 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ABHD6Q9BV23 337 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ELL3Q9HB65 397 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF107Q9UII5 783 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM184BQ9Y519 407 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 COLEC10Q9Y6Z7 277 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 FAM157AC9JC47 383 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 PRRT4C9JH25 899 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 AHSA1O95433 338 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 CXCL1P09341 107 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 THEGLP0DJG4 465 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 GJA4P35212 333 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 SGCGQ13326 291 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 FHL5Q5TD97 284 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 PTCRAQ6ISU1 281 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 FAM166AQ6J272 317 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 FBXO42Q6P3S6 717 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 ADAMTSL4Q6UY14 1074 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 OR10AD1Q8NGE0 317 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM230Q96A57 120 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 RAB39BQ96DA2 213 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 MALSU1Q96EH3 234 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 BSCL2Q96G97 398 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 COX14Q96I36 57 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 SNX22Q96L94 193 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 TOX2Q96NM4 488 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 SH3BGRL3Q9H299 93 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 PTGES2Q9H7Z7 377 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF701Q9NV72 531 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 OR52A1Q9UKL2 312 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 GPR132Q9UNW8 380 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 STARD10Q9Y365 291 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 EDDM13A0A1B0GTR0 161 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 H3BQ15 152 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 HRKO00198 91 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 NKX2-2O95096 273 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 ADH5P11766 374 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF708P17019 499 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 DMWDQ09019 674 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 ERV3-1Q14264 604 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 FAM78AQ5JUQ0 283 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 PLXDC2Q6UX71 529 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF574Q6ZN55 896 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 Q8WTZ3 238 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 NTNG2Q96CW9 530 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 RSPRY1Q96DX4 576 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 OR2M4Q96R27 311 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 CRISPLD2Q9H0B8 497 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 MMP25Q9NPA2 562 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 HIF3AQ9Y2N7 669 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 HDGFL3Q9Y3E1 203 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 LRRK1Q38SD2 2015 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 CXorf51AA0A1B0GTR3 108 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 A0A1W2PQ45 241 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 A0A1W2PQY0 241 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 H0YL77 283 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 CTSVO60911 334 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 CRTAPO75718 401 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 TUBG1P23258 451 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 HNRNPA1L2Q32P51 320 aaKnown RBP6.8□□□□□ -1.32
BRCA1-201ENST00000352993 CHRFAM7AQ494W8 412 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 TANGO2Q6ICL3 276 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 LINC00114Q6XXX2 140 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 COMMD1Q8N668 190 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 DTWD2Q8NBA8 298 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 POC1AQ8NBT0 407 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 SOX7Q9BT81 388 aa6.8□□□□□ -1.32
BRCA1-201ENST00000352993 GEMIN2O14893 280 aaKnown RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SLC31A1O15431 190 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SOCS1O15524 211 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SYT7O43581 403 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 PTBP3O95758 552 aaKnown RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 HCKP08631 526 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 H2BFMP0C1H6 154 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 TRGC1P0CF51 173 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 VSIG8P0DPA2 414 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 PNMTP11086 282 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF20P17024 532 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SLC26A5P58743 744 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 DLK1P80370 383 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 FAM3AP98173 230 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ISXQ2M1V0 245 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM268Q5VZI3 342 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 WBP2NLQ6ICG8 309 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 FIGLAQ6QHK4 219 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 CBLN3Q6UW01 205 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SFTPA1Q8IWL2 248 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 PHOSPHO2Q8TCD6 241 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 C1orf123Q9NWV4 160 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 INSL6Q9Y581 213 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SLCO1B1Q9Y6L6 691 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 KIAA1549LQ6ZVL6 1849 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 IGKV1D-42A0A075B6H8 117 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 LOC390937A0A1W2PQ73 354 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 WIPF3A6NGB9 483 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 CDRT15L2A8MXV6 281 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms