RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 LYG2Q86SG7 212 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 RPS19BP1Q86WX3 136 aaKnown RBP19.19■□□□□ 0.66
SHMT1-202ENST00000352886 NAXDQ8IW45 347 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 LRRC18Q8N456 261 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 SCARB1Q8WTV0 552 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 RAB3CQ96E17 227 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 NARFLQ9H6Q4 476 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 HPF1Q9NWY4 346 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 ZNF224Q9NZL3 707 aa19.19■□□□□ 0.66
SHMT1-202ENST00000352886 IGKV1-9A0A0C4DH69 117 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 POM121CA8CG34 1229 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 F5H5K5 113 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 CD8AP01732 235 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 IFNA6P05013 189 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 SLC6A9P48067 706 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 MC2RQ01718 297 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 C10orf128Q5T292 105 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 MYO7BQ6PIF6 2116 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 TMEM54Q969K7 222 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 PDCD10Q9BUL8 212 aa19.18■□□□□ 0.66
SHMT1-202ENST00000352886 OR5H14A6NHG9 310 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 NMBP08949 121 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 ENDOGQ14249 297 aaKnown RBP19.17■□□□□ 0.66
SHMT1-202ENST00000352886 LPCAT3Q6P1A2 487 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 ZNF546Q86UE3 836 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 GJC3Q8NFK1 279 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 RBPMSQ93062 196 aaKnown RBP19.17■□□□□ 0.66
SHMT1-202ENST00000352886 LYZL4Q96KX0 146 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 SH2D2AQ9NP31 389 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 MUC3AQ02505 3323 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 VAMP5O95183 116 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 CTSSP25774 331 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 DUSP3P51452 185 aaPredicted RBP19.17■□□□□ 0.66
SHMT1-202ENST00000352886 IL13RA1P78552 427 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 OR9K2Q8NGE7 335 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 OR4K15Q8NH41 348 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 WBP1Q96G27 269 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 LIN37Q96GY3 246 aaPredicted RBP19.17■□□□□ 0.66
SHMT1-202ENST00000352886 CXorf58Q96LI9 332 aa19.17■□□□□ 0.66
SHMT1-202ENST00000352886 RBM24Q9BX46 236 aaKnown RBP19.17■□□□□ 0.66
SHMT1-202ENST00000352886 hCG_1807616A0A1W2PRN6 198 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 C9orf170A2RU37 121 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 OR5H15A6NDH6 313 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 CRTAPO75718 401 aaPredicted RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 CD63P08962 238 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 HIST1H1DP16402 221 aaKnown RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 TBPP20226 339 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 MPGP29372 298 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 FGL1Q08830 312 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 ZNF468Q5VIY5 522 aaPredicted RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 ST8SIA4Q92187 359 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 NABP1Q96AH0 204 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 SEC22AQ96IW7 307 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 CYYR1Q96J86 154 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 NAA11Q9BSU3 229 aaPredicted RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 TNFSF11O14788 317 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 IL2RAP01589 272 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 GSTP1P09211 210 aaKnown RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 TMEM50BP56557 158 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 CSNK2A1P68400 391 aaPredicted RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 LRRC37A5PQ49AS3 106 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 TMEM123Q8N131 208 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 ADAD2Q8NCV1 583 aaKnown RBP19.16■□□□□ 0.66
SHMT1-202ENST00000352886 OR5D18Q8NGL1 313 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 OR6K3Q8NGY3 331 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 SSC4DQ8WTU2 575 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 NPRL2Q8WTW4 380 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 CCDC120Q96HB5 630 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 C1QTNF6Q9BXI9 259 aa19.16■□□□□ 0.66
SHMT1-202ENST00000352886 SCO1O75880 301 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 SPDEFO95238 335 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 AKR1C4P17516 323 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 AGTR1P30556 359 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 FOLR3P41439 243 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 MLF1P58340 268 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 SRSF4Q08170 494 aaKnown RBP19.15■□□□□ 0.66
SHMT1-202ENST00000352886 ZNF660Q6AZW8 331 aaPredicted RBP19.15■□□□□ 0.66
SHMT1-202ENST00000352886 SLC51BQ86UW2 128 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 MITD1Q8WV92 249 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 FN3KRPQ9HA64 309 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 SLC39A1Q9NY26 324 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 A0A0J9YW62 118 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 DHHO43323 396 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 CER1O95813 267 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 IGLV3-1P01715 115 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 VAMP1P23763 118 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 CALCRP30988 508 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 ZNF133P52736 654 aaPredicted RBP19.15■□□□□ 0.66
SHMT1-202ENST00000352886 TRIM61Q5EBN2 209 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 PEAR1Q5VY43 1037 aaPredicted RBP19.15■□□□□ 0.66
SHMT1-202ENST00000352886 RGS7BPQ6MZT1 257 aaPredicted RBP19.15■□□□□ 0.66
SHMT1-202ENST00000352886 CASTOR1Q8WTX7 329 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 NTNG2Q96CW9 530 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 PHB2Q99623 299 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 SDHAF2Q9NX18 166 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 COMMD9Q9P000 198 aa19.15■□□□□ 0.66
SHMT1-202ENST00000352886 LAMTOR5O43504 91 aa19.14■□□□□ 0.66
SHMT1-202ENST00000352886 RAD51DO75771 328 aa19.14■□□□□ 0.66
SHMT1-202ENST00000352886 KISS1Q15726 138 aa19.14■□□□□ 0.66
SHMT1-202ENST00000352886 MICBQ29980 383 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms