RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZNF878C9JN71 531 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 XRCC3O43542 346 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 RAB3DO95716 219 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 ITGB2P05107 769 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 MLF1P58340 268 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 PDCD1Q15116 288 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 CLVS2Q5SYC1 327 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 RGS7BPQ6MZT1 257 aaPredicted RBP12.27□□□□□ -0.45
TRIM4-201ENST00000349062 TMPRSS7Q7RTY8 843 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 EDEM2Q9BV94 578 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF700Q9H0M5 742 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 C9orf172C9J069 976 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 KRBOX1C9JBD0 128 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 RLN2P04090 185 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 RAB3AP20336 220 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 SUCLG1P53597 346 aaKnown RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 DSCR4P56555 118 aaPredicted RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 GK2Q14410 553 aaPredicted RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 ABHD17BQ5VST6 288 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 GALNTL5Q7Z4T8 443 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 GALNT16Q8N428 558 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 SLC6A7Q99884 636 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 CALHM2Q9HA72 323 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 PIPOXQ9P0Z9 390 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 AUP1Q9Y679 476 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 POLEQ07864 2286 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 AQP7P3A6NL99 342 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 CYB5AP00167 134 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 SERPINA2P20848 420 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 GMFBP60983 142 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 GLIPR1L1Q6UWM5 242 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 TMEM104Q8NE00 496 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 OR1M1Q8NGA1 313 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 OR5D14Q8NGL3 314 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 ADAT1Q9BUB4 502 aaKnown RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 PDCD10Q9BUL8 212 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 MRPL13Q9BYD1 178 aaKnown RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 REG4Q9BYZ8 158 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF275Q9NSD4 429 aaPredicted RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 TPRP12270 2363 aaKnown RBP12.26□□□□□ -0.45
TRIM4-201ENST00000349062 FAM230AA0A1W2PPH8 454 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 PLSCR5A0PG75 271 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF205O95201 554 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 LCATP04180 440 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 HOXA6P31267 233 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 RAP2BP61225 183 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 NKAPLQ5M9Q1 402 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 DCAF12L2Q5VW00 463 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 ANKRD16Q6P6B7 361 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 SIGLEC12Q96PQ1 595 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 SHARPINQ9H0F6 387 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 FAM206AQ9NX38 181 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 HDGFL3Q9Y3E1 203 aa12.26□□□□□ -0.45
TRIM4-201ENST00000349062 CCDC187A0A096LP49 1063 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 CBR3O75828 277 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ECDO95905 644 aaPredicted RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 PI3P19957 117 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 VAMP1P23763 118 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 CLDN15P56746 228 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZP4Q12836 540 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF169Q14929 603 aaPredicted RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 HES3Q5TGS1 186 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 STEAP1BQ6NZ63 245 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 AAED1Q7RTV5 226 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 GTPBP8Q8N3Z3 284 aaPredicted RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 OR10D3Q8NH80 312 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 SCARB1Q8WTV0 552 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 OIT3Q8WWZ8 545 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZCCHC4Q9H5U6 513 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZFHX4Q86UP3 3567 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 IGHV3-64DA0A0J9YX35 117 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 A0A1W2PNU3 283 aaPredicted RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 CCSO14618 274 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ANGPTL7O43827 346 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 UBCP0CG48 685 aaKnown RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 TRAPPC6BQ86SZ2 158 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 TMEM185AQ8NFB2 350 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZC3H10Q96K80 434 aaKnown RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 PIGQQ9BRB3 760 aa12.25□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF471Q9BX82 626 aaPredicted RBP12.25□□□□□ -0.45
TRIM4-201ENST00000349062 NTF4P34130 210 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 P2RY4P51582 365 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 H2BFSP57053 126 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 DYRK1AQ13627 763 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 BAIAP2L2Q6UXY1 529 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 SLC25A43Q8WUT9 341 aaPredicted RBP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 SLC6A15Q9H2J7 730 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ETV7Q9Y603 341 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ADAMTS20P59510 1910 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ANKRD20A5PA0PJZ0 165 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 F5H5P2 479 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 DHHO43323 396 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 PMP2P02689 132 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms