RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ZNF729A6NN14 1252 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 H7C1C5 153 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 SRSF10O75494 262 aaKnown RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 IFNA17P01571 189 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 SPARCP09486 303 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CT45A8P0DMV1 189 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CT45A9P0DMV2 189 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CRABP1P29762 137 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 LPAR6P43657 344 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 RPL27P61353 136 aaKnown RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 LCN6P62502 163 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 FAM3AP98173 230 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 EGR4Q05215 589 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 ELAVL1Q15717 326 aaKnown RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 TOMM34Q15785 309 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CT45A2Q5DJT8 189 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 DHRS11Q6UWP2 260 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 SLC22A24Q8N4F4 322 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CHST4Q8NCG5 386 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 OR4K15Q8NH41 348 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 NAT6Q93015 286 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 RPS10P5Q9NQ39 176 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 KIF26BQ2KJY2 2108 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 TRAV36DV7A0A075B6V5 113 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 IGLV1-36A0A0B4J1U3 117 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 OR2W5A6NFC9 320 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 FIGNL2A6NMB9 653 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 IGHMP01871 453 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 BGLAPP02818 100 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 RAB5AP20339 215 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 CD80P33681 288 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 PGDP52209 483 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 RAB2AP61019 212 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 HGFACQ04756 655 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 EIF2B1Q14232 305 aaKnown RBP14.1□□□□□ -0.15
HMGA1-202ENST00000347617 TMEM268Q5VZI3 342 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 PEG10Q86TG7 708 aaKnown RBP14.1□□□□□ -0.15
HMGA1-202ENST00000347617 POC1AQ8NBT0 407 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 OR4C3Q8NH37 302 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 NUBPLQ8TB37 319 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 MARCH1Q8TCQ1 289 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 METTL21AQ8WXB1 218 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 DGAT2Q96PD7 388 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 ABHD6Q9BV23 337 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 SLC26A1Q9H2B4 701 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 RGCCQ9H4X1 137 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 GHRLQ9UBU3 117 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 LRP12Q9Y561 859 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 CLDN16Q9Y5I7 305 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 PCDH15Q96QU1 1955 aa14.1□□□□□ -0.15
HMGA1-202ENST00000347617 ARID1BQ8NFD5 2236 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 LOC107986453A0A1B0GWG9 222 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SCDO00767 359 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 ZNF264O43296 627 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 LRP3O75074 770 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 HPGDP15428 266 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 UCP2P55851 309 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 MFGE8Q08431 387 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SPOCK1Q08629 439 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 FUT7Q11130 342 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SRSF5Q13243 272 aaKnown RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 RBM39Q14498 530 aaKnown RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SGCBQ16585 318 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 DNLZQ5SXM8 178 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 ZNF519Q8TB69 540 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 LAT2Q9GZY6 243 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 OR52A1Q9UKL2 312 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SLC5A6Q9Y289 635 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 STARD10Q9Y365 291 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 PMS2P1A4D2B8 440 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 TMEM150CB9EJG8 249 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 H3BSH0 61 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 HKR1P10072 659 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 LAP3P28838 519 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 QRFPP83859 136 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 IL15RAQ13261 267 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SURF2Q15527 256 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SLC23A3Q6PIS1 610 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 DNM1P34Q6PK57 102 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 OR4D6Q8NGJ1 314 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 OR1J1Q8NGS3 322 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 RHBDD1Q8TEB9 315 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 TAAR8Q969N4 342 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 PAPOLGQ9BWT3 736 aaKnown RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 TXNIPQ9H3M7 391 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 SMDT1Q9H4I9 107 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 ZMAT3Q9HA38 289 aaKnown RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 OR2S2Q9NQN1 319 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 FAM212BQ9NTI7 297 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-202ENST00000347617 OR5AC2Q9NZP5 309 aa14.09□□□□□ -0.15
HMGA1-202ENST00000347617 CABIN1Q9Y6J0 2220 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 LOC100509620A0A075B734 347 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 LY6G6EA0A0G2JKS1 128 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 C7orf77A4D0Y5 90 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 MSGN1A6NI15 193 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 M0R296 226 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 CER1O95813 267 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 ECI1P42126 302 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 RPS27P42677 84 aaKnown RBP14.08□□□□□ -0.16
HMGA1-202ENST00000347617 CLEC18BQ6UXF7 455 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms