RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PSG7Q13046 419 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 OR8B8Q15620 311 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 TRAM1Q15629 374 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 Q499Y3 187 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 ZMAT1Q5H9K5 638 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 OR2T2Q6IF00 324 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 PGAP1Q75T13 922 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 NUP37Q8NFH4 326 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 FGGYQ96C11 551 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 EXOSC4Q9NPD3 245 aaKnown RBP16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 NOX4Q9NPH5 578 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 ZNF275Q9NSD4 429 aaPredicted RBP16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 TXNL4BQ9NX01 149 aaKnown RBP16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 DHDHQ9UQ10 334 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 RNF115Q9Y4L5 304 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 SPEF1Q9Y4P9 236 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 A0A1W2PPR1 153 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 LOC390937A0A1W2PQ73 354 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 A6NHS1 94 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 E7EQL1 145 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 AIREO43918 545 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 HLA-DPB1P04440 258 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 OCM2P0CE71 109 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 FAHP16930 419 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 TTKP33981 857 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 CTF1Q16619 201 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 C22orf42Q6IC83 251 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 RGS7BPQ6MZT1 257 aaPredicted RBP16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 OR56B2PQ8NGI1 322 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 ZNF391Q9UJN7 358 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 SSR3Q9UNL2 185 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 PLCE1Q9P212 2302 aa16.29■□□□□ 0.2
CHMP4A-201ENST00000347519 SHISA3A0PJX4 238 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 CD300LBA8K4G0 201 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 GABARAPO95166 117 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 NCS1P62166 190 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 DAZAP2Q15038 168 aaPredicted RBP16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 HAVCR1Q96D42 359 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 SPOCK3Q9BQ16 436 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 CA10Q9NS85 328 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 MYEF2Q9P2K5 600 aaKnown RBP16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 PIGLQ9Y2B2 252 aa16.28■□□□□ 0.2
CHMP4A-201ENST00000347519 UTP20O75691 2785 aaKnown RBP16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 TRAV8-7A0A075B6U6 113 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 GGT3PA6NGU5 568 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 SERPINA3P01011 423 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 UCHL1P09936 223 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 RAC2P15153 192 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 ZNF250P15622 560 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 CFL1P23528 166 aaKnown RBP16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 FGF9P31371 208 aaPredicted RBP16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 MAP2K3P46734 347 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 ZNF718Q3SXZ3 478 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 MBNL2Q5VZF2 373 aaKnown RBP16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 UNQ6126/PRO20091Q6UXV3 157 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 OR5AS1Q8N127 324 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 SEMA6DQ8NFY4 1073 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 TMEM106AQ96A25 262 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 MRPL37Q9BZE1 423 aaKnown RBP16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 POU2F3Q9UKI9 436 aa16.27■□□□□ 0.2
CHMP4A-201ENST00000347519 GATBO75879 557 aaKnown RBP16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 GALP22466 123 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 COL8A1P27658 744 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 VBP1P61758 197 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 RIPPLY1Q0D2K3 151 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 ADIPOQQ15848 244 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 DMRTC1Q5HYR2 192 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 SP5Q6BEB4 398 aaPredicted RBP16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 BHLHE23Q8NDY6 225 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 SYNPRQ8TBG9 265 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 ISOC1Q96CN7 298 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 SYT3Q9BQG1 590 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 OPA3Q9H6K4 179 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 TAS2R4Q9NYW5 299 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 PURGQ9UJV8 347 aaKnown RBP16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 RHBDD3Q9Y3P4 386 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 LRRK2Q5S007 2527 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 ROS1P08922 2347 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 A6NNC1 897 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 MTRF1O75570 445 aaKnown RBP16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 KITLGP21583 273 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 TUBG1P23258 451 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 TIMM50Q3ZCQ8 353 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 GDPGP1Q6ZNW5 385 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 C1orf174Q8IYL3 243 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 PARP16Q8N5Y8 322 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 CCDC54Q8NEL0 328 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 GTF3AQ92664 365 aaKnown RBP16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF442Q9H7R0 627 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 TUBG2Q9NRH3 451 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 DUSP13Q9UII6 198 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 CMAHPQ9Y471 501 aa16.26■□□□□ 0.19
CHMP4A-201ENST00000347519 ICE1Q9Y2F5 2266 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 HRNRQ86YZ3 2850 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 SMIM31A0A1B0GVY4 71 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 DHRS7CA6NNS2 312 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 IQCF6A8MYZ5 107 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 CLEC2LP0C7M8 214 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF12P17014 697 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF20P17024 532 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms