RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FOLR3P41439 243 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 GRB2P62993 217 aaKnown RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 KCTD9Q7L273 389 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 OR9K2Q8NGE7 335 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 C1orf147Q96MC9 270 aaPredicted RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF107Q9UII5 783 aaPredicted RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 A0A0J9YW62 118 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 F10P00742 488 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 FAHP16930 419 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 AVPR2P30518 371 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 ENDOGQ14249 297 aaKnown RBP13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 KCNMB1Q16558 191 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF546Q86UE3 836 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 OR5M8Q8NGP6 311 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 OR4K15Q8NH41 348 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 PAQR8Q8TEZ7 354 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 SRXN1Q9BYN0 137 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 NELFAQ9H3P2 528 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 KNTC1P50748 2209 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 LAMA5O15230 3695 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 RFPL4AA6NLU0 287 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 RFPL4AL1F8VTS6 287 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 YKT6O15498 198 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 RAD51DO75771 328 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 PRSS12P56730 875 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 IL13RA1P78552 427 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 ZFP36L1Q07352 338 aaKnown RBP13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 GK2Q14410 553 aaPredicted RBP13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 BEX5Q5H9J7 111 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 SUN5Q8TC36 379 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 M1APQ8TC57 530 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 MARCH1Q8TCQ1 289 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 ULBP2Q9BZM5 246 aa13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
VIPAS39-202ENST00000343765 TDGF1P13385 188 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 HOXA6P31267 233 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 MC2RQ01718 297 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF239Q16600 458 aaKnown RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 CLVS2Q5SYC1 327 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 LYG2Q86SG7 212 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 SLC25A42Q86VD7 318 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 KCNG3Q8TAE7 436 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 MAFIPQ8WZ33 124 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 FN3KRPQ9HA64 309 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 SLC2A8Q9NY64 477 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 PLEK2Q9NYT0 353 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 LOC102725191A0A1B0GVB3 256 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 CYC1P08574 325 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 CD63P08962 238 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 HIST1H1DP16402 221 aaKnown RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 ZBTB25P24278 435 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 FKBP2P26885 142 aaKnown RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 MICBQ29980 383 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 GJC3Q8NFK1 279 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 NABP1Q96AH0 204 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 KIF25Q9UIL4 384 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 C9orf170A2RU37 121 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 STMND1H3BQB6 276 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 DHHO43323 396 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 SCGNO76038 276 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 CER1O95813 267 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 NMBP08949 121 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 DUSP3P51452 185 aaPredicted RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 TMEM50BP56557 158 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 MLF1P58340 268 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 ARFRP1Q13795 201 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 KISS1Q15726 138 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 OR51T1Q8NGJ9 327 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 RBPMSQ93062 196 aaKnown RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 PIGTQ969N2 578 aa13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 NAA11Q9BSU3 229 aaPredicted RBP13.09□□□□□ -0.31
VIPAS39-202ENST00000343765 TNRC6BQ9UPQ9 1833 aaKnown RBP13.08□□□□□ -0.31
VIPAS39-202ENST00000343765 hCG_1807616A0A1W2PRN6 198 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 PI3P19957 117 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 SERPINA2P20848 420 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 CCL1P22362 96 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 NPY4RP50391 375 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 ATP1B3P54709 279 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 LSM6P62312 80 aaKnown RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 CSNK2A1P68400 391 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF660Q6AZW8 331 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 TCEAL6Q6IPX3 200 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 TMEM123Q8N131 208 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 SCARB1Q8WTV0 552 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 COMMD9Q9P000 198 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 FAM186AA6NE01 2351 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 ZFHX4Q86UP3 3567 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 EEF1E1-BLOC1S5C9J1V9 151 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms