RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CASP7P55210 303 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 CKS1BP61024 79 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 DGCR2P98153 550 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SLC35D3Q5M8T2 416 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 PRAMEF20Q5VT98 475 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 TIMP4Q99727 224 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 IL19Q9UHD0 177 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 APBB3O95704 486 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 FCGR2AP12318 317 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 NMUP48645 174 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 ERHP84090 104 aaKnown RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 CD226Q15762 336 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SYT14P1Q58G82 188 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MANEAQ5SRI9 462 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 LHFPL4Q7Z7J7 247 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 NXF5Q9H1B4 397 aaKnown RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.63□□□□□ -1.51
VCAN-203ENST00000343200 CACNA1AO00555 2505 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MFSD2BA6NFX1 497 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 GSTP1P09211 210 aaKnown RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 ST6GAL1P15907 406 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 OR1D2P34982 312 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 DHODHQ02127 395 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 INCA1Q0VD86 236 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SPANXN5Q5MJ07 72 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 GRASPQ7Z6J2 395 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 GKN2Q86XP6 184 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 CDRT4Q8N9R6 151 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 YJEFN3A6XGL0 299 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 FAM171A2A8MVW0 826 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SIRPB1O00241 398 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 F7P08709 466 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 TAL1P17542 331 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 HOXA6P31267 233 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 PNLIPRP2P54317 469 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 TSPAN31Q12999 210 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MLF2Q15773 248 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 DEFB134Q4QY38 66 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 ERGIC1Q969X5 290 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 NTNG2Q96CW9 530 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 GPR137Q96N19 417 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 GABARAPL3Q9BY60 117 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 PLAGL1Q9UM63 463 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 ARRDC5A6NEK1 342 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MT-ATP6P00846 226 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 LPPQ93052 612 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 CDX2Q99626 313 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 NAA60Q9H7X0 242 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 IGSF5Q9NSI5 407 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 TNFSF11O14788 317 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SLC35B1P78383 322 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 EOGTQ5NDL2 527 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MYPOPQ86VE0 399 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 C1orf127Q8N9H9 656 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SPACA9Q96E40 222 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 ZNF2Q9BSG1 426 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 MARVELD1Q9BSK0 173 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 VN1R3Q9BXE9 311 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 ACPTQ9BZG2 426 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MED20Q9H944 212 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 ROBO2Q9HCK4 1378 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 NXT1Q9UKK6 140 aaKnown RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 ZNF541Q9H0D2 1346 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 LINC00862A6NCI5 91 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 C11orf94C9JXX5 98 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 YIF1AO95070 293 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MT-CO3P00414 261 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SMIM13P0DJ93 91 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 CD96P40200 585 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 KIR2DL3P43628 341 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 PRLHRP49683 370 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 SDHAF4Q5VUM1 108 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 VSIG10LQ86VR7 867 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 FUBP1Q96AE4 644 aaKnown RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 FUT9Q9Y231 359 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 LRP4O75096 1905 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 GEMIN2O14893 280 aaKnown RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 CA1P00915 261 aaPredicted RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 CD79AP11912 226 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TIMP2P16035 220 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SLC6A1P30531 599 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 PRSS1P07477 247 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 HIST1H1EP10412 219 aaKnown RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 FPGSQ05932 587 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR1Q1Q15612 314 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TRMT12Q53H54 448 aaKnown RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 DPY19L2P2Q6ZN68 376 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CLEC20AQ6ZU45 233 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 WFIKKN2Q8TEU8 576 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 THOC3Q96J01 351 aaKnown RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 BOCQ9BWV1 1114 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR2W1Q9Y3N9 320 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TIMM9Q9Y5J7 89 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TRAV1-2A0A0B4J238 106 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SOX15O60248 233 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 PRAMEF11O60813 436 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms