RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NUS1Q96E22 293 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 SRA1Q9HD15 236 aaKnown RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 TM7SF3Q9NS93 570 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 FBXO34Q9NWN3 711 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 VAX2Q9UIW0 290 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 ZNF705GA8MUZ8 300 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 CTSVO60911 334 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 IFI6P09912 130 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 AARDQ4LEZ3 155 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 FHL5Q5TD97 284 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 LSRQ86X29 649 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 LINC01555Q8NAE3 123 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 NKD1Q969G9 470 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 TAAR8Q969N4 342 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 JSRP1Q96MG2 331 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 RAB11FIP5Q9BXF6 653 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 SMIM3Q9BZL3 60 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 COLEC10Q9Y6Z7 277 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 TRDCB7Z8K6 153 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 BPNT1O95861 308 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 HSPB1P04792 205 aaKnown RBP16.49■□□□□ 0.23
SMPD1-201ENST00000342245 SRP19P09132 144 aaKnown RBP16.49■□□□□ 0.23
SMPD1-201ENST00000342245 MMP16P51512 607 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 ZNF117Q03924 483 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 SLC22A6Q4U2R8 563 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 TMEM31Q5JXX7 168 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 ABLIM2Q6H8Q1 611 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 ZNF573Q86YE8 665 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 OR2A1Q8NGT9 310 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 FNDC9Q8TBE3 224 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 IGSF21Q96ID5 467 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 TSSK2Q96PF2 358 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 RTBDNQ9BSG5 229 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-201ENST00000342245 OR8D2Q9GZM6 311 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 HIF3AQ9Y2N7 669 aa16.49■□□□□ 0.23
SMPD1-201ENST00000342245 TRBV24-1A0A075B6N3 115 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 WIPF3A6NGB9 483 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 GPR137BO60478 399 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 IFNA21P01568 189 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 SERPINA2P20848 420 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 RPP30P78346 268 aaKnown RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 TANGO2Q6ICL3 276 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 FOXRED2Q8IWF2 684 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 APCDD1LQ8NCL9 501 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 TMEM104Q8NE00 496 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 CXXC1Q9P0U4 656 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 KIAA1456Q9P272 454 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 MYOTQ9UBF9 498 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 FOXD3Q9UJU5 478 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 NUMA1Q14980 2115 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 TMEM210A6NLX4 147 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 K7N7A8 449 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 MASP2O00187 686 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 SOX15O60248 233 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 APODP05090 189 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 GSTP1P09211 210 aaKnown RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 TLX1P31314 330 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 DPTQ07507 201 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 KIRREL2Q6UWL6 708 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 SLC16A14Q7RTX9 510 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 MFSD9Q8NBP5 474 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 OR1P1Q8NH06 330 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 LIPHQ8WWY8 451 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 EMG1Q92979 244 aaKnown RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 SNX22Q96L94 193 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 MACROD1Q9BQ69 325 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 FBLN5Q9UBX5 448 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 CYP8B1Q9UNU6 501 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 HEATR5BQ9P2D3 2071 aa16.48■□□□□ 0.23
SMPD1-201ENST00000342245 TCF20Q9UGU0 1960 aaKnown RBP16.48■□□□□ 0.23
SMPD1-201ENST00000342245 LNP1A1A4G5 178 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 STATHP02808 62 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 CPMP14384 443 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 CST5P28325 142 aaPredicted RBP16.47■□□□□ 0.23
SMPD1-201ENST00000342245 CCKARP32238 428 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 RBMXP38159 391 aaKnown RBP16.47■□□□□ 0.23
SMPD1-201ENST00000342245 BTN3A2P78410 334 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 PNRC1Q12796 327 aaPredicted RBP16.47■□□□□ 0.23
SMPD1-201ENST00000342245 SLC25A26Q70HW3 274 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 SGPP2Q8IWX5 399 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 SLC35G3Q8N808 338 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 G6PC3Q9BUM1 346 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 CDH20Q9HBT6 801 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 GRHPRQ9UBQ7 328 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 HHLA2Q9UM44 414 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 CLDN34H7C241 214 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 ABLIM3O94929 683 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 PNLIPP16233 465 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 ROM1Q03395 351 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 MEP1BQ16820 701 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 METRNLQ641Q3 311 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 KCTD18Q6PI47 426 aaPredicted RBP16.47■□□□□ 0.23
SMPD1-201ENST00000342245 LYPD6Q86Y78 171 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 OR2L8Q8NGY9 312 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 NPRL2Q8WTW4 380 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 RARRES2Q99969 163 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 APOBEC3BQ9UH17 382 aaKnown RBP16.47■□□□□ 0.23
SMPD1-201ENST00000342245 ZNF346Q9UL40 294 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms