RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 DUS4LO95620 317 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 VSIG10L2P0DP72 767 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 NANOS3P60323 173 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 FABP9Q0Z7S8 132 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 MSMO1Q15800 293 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 OR52N4Q8NGI2 321 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 OR1J1Q8NGS3 322 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ZPLD1Q8TCW7 415 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF799Q96GE5 643 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PRRX2Q99811 253 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 UFSP2Q9NUQ7 469 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 SHISA3A0PJX4 238 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 EIF1BO60739 113 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ADRA2CP18825 462 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 FPR2P25090 351 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 IL2RGP31785 369 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PPIAP62937 165 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 CPT1CQ8TCG5 803 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 NANOS1Q8WY41 292 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ST8SIA1Q92185 356 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PRSS27Q9BQR3 290 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PATZ1Q9HBE1 687 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 SERTAD4Q9NUC0 356 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 TMEM100Q9NV29 134 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 UQCC1Q9NVA1 299 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 CST4P01036 141 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 FAHP16930 419 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ASCL1P50553 236 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ERVK-16P61578 105 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PSG6Q00889 435 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 OR8G2PQ6IF36 304 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 TP53TG5Q9Y2B4 290 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 CCDC88CQ9P219 2028 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 OR4C45A6NMZ5 311 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 SHISA8B8ZZ34 492 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 SFT2D2O95562 160 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 MT-ND4LP03901 98 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 PPP1CAP62136 330 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 FOXF1Q12946 379 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF141Q15928 474 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 MESTQ5EB52 335 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF813Q6ZN06 617 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 SUCNR1Q9BXA5 334 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 CDK2AP1O14519 115 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 RPS15P62841 145 aaKnown RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 FAM24BQ8N5W8 94 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 NECAP1Q8NC96 275 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 GPX8Q8TED1 209 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 C19orf12Q9NSK7 152 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 CES1P1Q9UKY3 287 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF273Q14593 569 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 RPL7L1Q6DKI1 246 aaKnown RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 MAML2Q8IZL2 1156 aaPredicted RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF485Q8NCK3 441 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 OR51F2Q8NH61 342 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ELSPBP1Q96BH3 223 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 MMP24Q9Y5R2 645 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF587BE7ETH6 402 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 HIST1H1DP16402 221 aaKnown RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 RAB31Q13636 194 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 PNLIPRP3Q17RR3 467 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 CDC20BQ86Y33 519 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ADAT1Q9BUB4 502 aaKnown RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 MRPL22Q9NWU5 206 aaKnown RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 IGHV3-9P01782 118 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 FAM219AQ8IW50 185 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 BHLHE23Q8NDY6 225 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 TOLLIPQ9H0E2 274 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ANKRD10Q9NXR5 420 aa13.3□□□□□ -0.28
RRP1B-201ENST00000340648 RCL1Q9Y2P8 373 aaKnown RBP13.3□□□□□ -0.28
RRP1B-201ENST00000340648 ABHD16AO95870 558 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 EDN3P14138 238 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 DVL1P1P54792 670 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 ABHD17BQ5VST6 288 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 C19orf48Q6RUI8 117 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 STPG2Q8N412 459 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 NUBPLQ8TB37 319 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 SLC25A43Q8WUT9 341 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 PGLYRP3Q96LB9 341 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 LHX9Q9NQ69 397 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 MCTS1Q9ULC4 181 aaKnown RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 ANGPTL7O43827 346 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 CTRB1P17538 263 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 PDLIM3Q53GG5 364 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 C1QL3Q5VWW1 255 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 CTRB2Q6GPI1 263 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 PRSS54Q6PEW0 395 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 GNPNAT1Q96EK6 184 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 GAR1Q9NY12 217 aaKnown RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 RAB27BO00194 218 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 HRKO00198 91 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 MT-CO2P00403 227 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms