RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 FASLGP48023 281 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 RAP1BP61224 184 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 RAP1AP62834 184 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 CLEC18BQ6UXF7 455 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 PIGTQ969N2 578 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.37
CPSF7-201ENST00000340437 CHST11Q9NPF2 352 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF319Q9P2F9 582 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-201ENST00000340437 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.37
CPSF7-201ENST00000340437 HSPB2A8KAH6 182 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 RAMP1O60894 148 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 NPIPB7O75200 414 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 RAD51DO75771 328 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 F10P00742 488 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 HEXBP07686 556 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF41P51814 821 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-201ENST00000340437 DCAF7P61962 342 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 HSPB2Q16082 182 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 C14orf28Q4W4Y0 310 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 PLAC9Q5JTB6 97 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 C1orf100Q5SVJ3 147 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 STT3BQ8TCJ2 826 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 PIK3IP1Q96FE7 263 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 SERINC1Q9NRX5 453 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 WDFY3Q8IZQ1 3526 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 BDP1A6H8Y1 2624 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 MED6O75586 246 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 ADCYAP1P18509 176 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-201ENST00000340437 UEVLDQ8IX04 471 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 STOML3Q8TAV4 291 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 EDEM2Q9BV94 578 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 TWSG1Q9GZX9 223 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 FAM206AQ9NX38 181 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 IGHV3-15A0A0B4J1V0 119 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 LDLRAD4O15165 306 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
CPSF7-201ENST00000340437 SLC25A4P12235 298 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 FSTP19883 344 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 MYBPHQ13203 477 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 TMEM176BQ3YBM2 270 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-201ENST00000340437 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 DRAM2Q6UX65 266 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 OR10S1Q8NGN2 331 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 TOMM40LQ969M1 308 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 DDIT4LQ96D03 193 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 CDC6Q99741 560 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
CPSF7-201ENST00000340437 LRP3O75074 770 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 ETV3LQ6ZN32 361 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 OR8B12Q8NGG6 310 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 RNF133Q8WVZ7 376 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 EDAQ92838 391 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 KCNK17Q96T54 332 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 C5orf66Q9H5L9 145 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF726A6NNF4 738 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 STMND1H3BQB6 276 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 CCR5P51681 352 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 SNU13P55769 128 aaKnown RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 C1QL2Q7Z5L3 287 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 RNF141Q8WVD5 230 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 LPAR5Q9H1C0 372 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 SDHAF3Q9NRP4 125 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 IGKV3D-11A0A0A0MRZ8 115 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 FAM221AA4D161 298 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 NUDT21O43809 227 aaKnown RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 TPPPO94811 219 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 LAP3P28838 519 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 GUCA1AP43080 201 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 KCNJ3P48549 501 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 ANKRD55Q3KP44 614 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 C20orf24Q9BUV8 137 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF576Q9H609 170 aa12.75□□□□□ -0.37
CPSF7-201ENST00000340437 C8orf33Q9H7E9 229 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 PURGQ9UJV8 347 aaKnown RBP12.75□□□□□ -0.37
CPSF7-201ENST00000340437 FTCDNL1E5RQL4 147 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 WDPCPO95876 746 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 QDPRP09417 244 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 NME1P15531 152 aaKnown RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 CD80P33681 288 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 CFHR1Q03591 330 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 C17orf67Q0P5P2 114 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 PDZK1IP1Q13113 114 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 CHRFAM7AQ494W8 412 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 PHF19Q5T6S3 580 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 PGAP1Q75T13 922 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 WDR77Q9BQA1 342 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 HDHD3Q9BSH5 251 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 BPNT1O95861 308 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms