RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ST3GAL6Q9Y274 331 aa13.11□□□□□ -0.31
RET-201ENST00000340058 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
RET-201ENST00000340058 SIRPB1O00241 398 aa13.11□□□□□ -0.31
RET-201ENST00000340058 PLA2G10O15496 165 aa13.11□□□□□ -0.31
RET-201ENST00000340058 XRCC3O43542 346 aa13.11□□□□□ -0.31
RET-201ENST00000340058 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
RET-201ENST00000340058 AKR1C8PQ5T2L2 129 aa13.11□□□□□ -0.31
RET-201ENST00000340058 CT55Q8WUE5 264 aa13.11□□□□□ -0.31
RET-201ENST00000340058 ST8SIA4Q92187 359 aa13.11□□□□□ -0.31
RET-201ENST00000340058 DUSP15Q9H1R2 295 aaPredicted RBP13.11□□□□□ -0.31
RET-201ENST00000340058 ABCA1O95477 2261 aa13.1□□□□□ -0.31
RET-201ENST00000340058 CCDC187A0A096LP49 1063 aa13.1□□□□□ -0.31
RET-201ENST00000340058 PMS2P2O95744 297 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ACSM4P0C7M7 580 aa13.1□□□□□ -0.31
RET-201ENST00000340058 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
RET-201ENST00000340058 PLPP5Q8NEB5 264 aa13.1□□□□□ -0.31
RET-201ENST00000340058 OR1J2Q8NGS2 313 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ARL11Q969Q4 196 aa13.1□□□□□ -0.31
RET-201ENST00000340058 TMPRSS13Q9BYE2 586 aa13.1□□□□□ -0.31
RET-201ENST00000340058 SLCO5A1Q9H2Y9 848 aa13.1□□□□□ -0.31
RET-201ENST00000340058 BCO1Q9HAY6 547 aa13.1□□□□□ -0.31
RET-201ENST00000340058 TCFL5Q9UL49 500 aa13.1□□□□□ -0.31
RET-201ENST00000340058 A0A1W2PQM1 296 aa13.1□□□□□ -0.31
RET-201ENST00000340058 PTP4A3O75365 173 aa13.1□□□□□ -0.31
RET-201ENST00000340058 THY1P04216 161 aa13.1□□□□□ -0.31
RET-201ENST00000340058 OR4E1P0C645 316 aa13.1□□□□□ -0.31
RET-201ENST00000340058 LIMS1P48059 325 aa13.1□□□□□ -0.31
RET-201ENST00000340058 RAB1AP62820 205 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
RET-201ENST00000340058 OR2AK2Q8NG84 335 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ZNF285Q96NJ3 590 aa13.1□□□□□ -0.31
RET-201ENST00000340058 SPIN2AQ99865 258 aa13.1□□□□□ -0.31
RET-201ENST00000340058 SPIN2BQ9BPZ2 258 aa13.1□□□□□ -0.31
RET-201ENST00000340058 OCSTAMPQ9BR26 566 aa13.1□□□□□ -0.31
RET-201ENST00000340058 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ICAM5Q9UMF0 924 aa13.1□□□□□ -0.31
RET-201ENST00000340058 MYO7BQ6PIF6 2116 aa13.1□□□□□ -0.31
RET-201ENST00000340058 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
RET-201ENST00000340058 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
RET-201ENST00000340058 KLK10O43240 276 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
RET-201ENST00000340058 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
RET-201ENST00000340058 ZNF768Q9H5H4 540 aaKnown RBP13.1□□□□□ -0.31
RET-201ENST00000340058 ZFP64Q9NPA5 681 aa13.1□□□□□ -0.31
RET-201ENST00000340058 NPAP1Q9NZP6 1156 aa13.1□□□□□ -0.31
RET-201ENST00000340058 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
RET-201ENST00000340058 ACTL6BO94805 426 aa13.09□□□□□ -0.31
RET-201ENST00000340058 PTBP1P26599 531 aaKnown RBP eCLIP13.09□□□□□ -0.31
RET-201ENST00000340058 PPT1P50897 306 aa13.09□□□□□ -0.31
RET-201ENST00000340058 TGIF1Q15583 401 aa13.09□□□□□ -0.31
RET-201ENST00000340058 SHEQ5VZ18 495 aa13.09□□□□□ -0.31
RET-201ENST00000340058 ABHD3Q8WU67 409 aa13.09□□□□□ -0.31
RET-201ENST00000340058 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
RET-201ENST00000340058 FZR1Q9UM11 496 aa13.09□□□□□ -0.31
RET-201ENST00000340058 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
RET-201ENST00000340058 UBBP0CG47 229 aa13.09□□□□□ -0.31
RET-201ENST00000340058 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
RET-201ENST00000340058 OR5H8P0DN80 308 aa13.09□□□□□ -0.31
RET-201ENST00000340058 MMP15P51511 669 aa13.09□□□□□ -0.31
RET-201ENST00000340058 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
RET-201ENST00000340058 FAM109AQ8N4B1 249 aa13.09□□□□□ -0.31
RET-201ENST00000340058 ZNF808Q8N4W9 903 aaPredicted RBP13.09□□□□□ -0.31
RET-201ENST00000340058 OR52H1Q8NGJ2 320 aa13.09□□□□□ -0.31
RET-201ENST00000340058 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
RET-201ENST00000340058 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
RET-201ENST00000340058 GLSO94925 669 aaPredicted RBP13.09□□□□□ -0.31
RET-201ENST00000340058 IFNA17P01571 189 aa13.09□□□□□ -0.31
RET-201ENST00000340058 OR3A4PP47883 348 aa13.09□□□□□ -0.31
RET-201ENST00000340058 DYRK1AQ13627 763 aa13.09□□□□□ -0.31
RET-201ENST00000340058 ZADH2Q8N4Q0 377 aa13.09□□□□□ -0.31
RET-201ENST00000340058 TMED6Q8WW62 240 aa13.09□□□□□ -0.31
RET-201ENST00000340058 YIPF5Q969M3 257 aa13.09□□□□□ -0.31
RET-201ENST00000340058 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
RET-201ENST00000340058 ZNF385AQ96PM9 386 aaKnown RBP13.09□□□□□ -0.31
RET-201ENST00000340058 SARGQ9BW04 601 aa13.09□□□□□ -0.31
RET-201ENST00000340058 PRR13Q9NZ81 148 aa13.09□□□□□ -0.31
RET-201ENST00000340058 FOXJ3Q9UPW0 622 aa13.09□□□□□ -0.31
RET-201ENST00000340058 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
RET-201ENST00000340058 TMEM272A0A1B0GTI8 110 aa13.08□□□□□ -0.31
RET-201ENST00000340058 LIPT2A6NK58 231 aa13.08□□□□□ -0.31
RET-201ENST00000340058 ADAM10O14672 748 aa13.08□□□□□ -0.31
RET-201ENST00000340058 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.31
RET-201ENST00000340058 SCO1O75880 301 aa13.08□□□□□ -0.31
RET-201ENST00000340058 PPP3CBP16298 524 aa13.08□□□□□ -0.31
RET-201ENST00000340058 NFYBP25208 207 aa13.08□□□□□ -0.31
RET-201ENST00000340058 FCGR2CP31995 323 aa13.08□□□□□ -0.31
RET-201ENST00000340058 EFNB2P52799 333 aa13.08□□□□□ -0.31
RET-201ENST00000340058 KISS1Q15726 138 aa13.08□□□□□ -0.31
RET-201ENST00000340058 SHANK1Q9Y566 2161 aa13.08□□□□□ -0.32
RET-201ENST00000340058 SLC22A20A6NK97 555 aa13.08□□□□□ -0.32
RET-201ENST00000340058 CEBPZOSA8MTT3 80 aa13.08□□□□□ -0.32
RET-201ENST00000340058 DEGS1O15121 323 aa13.08□□□□□ -0.32
RET-201ENST00000340058 XRCC2O43543 280 aa13.08□□□□□ -0.32
RET-201ENST00000340058 SFRP5Q5T4F7 317 aa13.08□□□□□ -0.32
RET-201ENST00000340058 C6orf201Q7Z4U5 140 aa13.08□□□□□ -0.32
RET-201ENST00000340058 PRSS35Q8N3Z0 413 aa13.08□□□□□ -0.32
RET-201ENST00000340058 SLC38A9Q8NBW4 561 aa13.08□□□□□ -0.32
RET-201ENST00000340058 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
RET-201ENST00000340058 SLC23A1Q9UHI7 598 aa13.08□□□□□ -0.32
RET-201ENST00000340058 OR5H14A6NHG9 310 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms