RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MED12LQ86YW9 2145 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 VSIG8P0DPA2 414 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 CD79AP11912 226 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 EIF2B2P49770 351 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 KRTAP27-1Q3LI81 207 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 NRN1LQ496H8 165 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 GPER1Q99527 375 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 MARVELD1Q9BSK0 173 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 SCNM1Q9BWG6 230 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 GMDSO60547 372 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 ZNF169Q14929 603 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 SFRP4Q6FHJ7 346 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 NUDT15Q9NV35 164 aa19.53■□□□□ 0.72
PDLIM2-203ENST00000339162 SVILO95425 2214 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 INMT-MINDY4F8WBC2 141 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 MTRF1O75570 445 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 GLIPR1L1Q6UWM5 242 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 ZNF101Q8IZC7 436 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 CMBLQ96DG6 245 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 CACNG6Q9BXT2 260 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 B3GNT2Q9NY97 397 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 LUZP4Q9P127 313 aa19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 ANKRD11Q6UB99 2663 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-203ENST00000339162 LOC100509620A0A075B734 347 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 A8MV72 311 aaPredicted RBP19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 MRPS10P82664 201 aaKnown RBP19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 QRFPP83859 136 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 HIKESHIQ53FT3 197 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 PIGTQ969N2 578 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 DPAGT1Q9H3H5 408 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 HRASLSQ9HDD0 168 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 MRPS28Q9Y2Q9 187 aaKnown RBP19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 ZNF175Q9Y473 711 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 ALG5Q9Y673 324 aa19.52■□□□□ 0.71
PDLIM2-203ENST00000339162 THBS4P35443 961 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 TNK1Q13470 666 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 SEMA6DQ8NFY4 1073 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 C15orf40Q8WUR7 153 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 CLCF1Q9UBD9 225 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 ARHGAP21Q5T5U3 1957 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 MYO7BQ6PIF6 2116 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 ATMQ13315 3056 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 A0A1W2PP11 408 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 CCNKO75909 580 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 IL18BPO95998 194 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 ZNF92Q03936 586 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 DYRK1AQ13627 763 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 FBXW9Q5XUX1 488 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 TMEM104Q8NE00 496 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 CREB3L1Q96BA8 519 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 CHST5Q9GZS9 411 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 GPR173Q9NS66 373 aa19.51■□□□□ 0.71
PDLIM2-203ENST00000339162 ANKRD20A5PA0PJZ0 165 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 GFRA3O60609 400 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 BPNT1O95861 308 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 TCRBP04435 133 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 ALDOBP05062 364 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 FCGR2AP12318 317 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 EDN3P14138 238 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 PRSS3P35030 304 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 RAB1AP62820 205 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 KISS1Q15726 138 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 CRIP3Q6Q6R5 217 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 GMPPAQ96IJ6 420 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 MCUBQ9NWR8 336 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 RAB22AQ9UL26 194 aa19.5■□□□□ 0.71
PDLIM2-203ENST00000339162 C5orf49A4QMS7 147 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 WIPF3A6NGB9 483 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 AQP7O14520 342 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 RBBP9O75884 186 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 PCGF3Q3KNV8 242 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 IGFL3Q6UXB1 125 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 DNM1P46Q6ZS02 220 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 RTN4RL2Q86UN3 420 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 SSC4DQ8WTU2 575 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 ITGB1BP2Q9UKP3 347 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 ACACAQ13085 2346 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 H7C417 338 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 ECDO95905 644 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 Q6ZSR3 168 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 UTS2BQ765I0 119 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 C1QL2Q7Z5L3 287 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 PP6455Q8WZ26 134 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 C1orf147Q96MC9 270 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 NICN1Q9BSH3 213 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 BANF2Q9H503 90 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 MTFP1Q9UDX5 166 aa19.49■□□□□ 0.71
PDLIM2-203ENST00000339162 RAB6AP20340 208 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 VEGFCP49767 419 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 CHAC2Q8WUX2 184 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 PTX4Q96A99 478 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 NKIRAS2Q9NYR9 191 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 NPAP1Q9NZP6 1156 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 POU2F3Q9UKI9 436 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 CACNA1GO43497 2377 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 TMEM235A6NFC5 223 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 RAB27BO00194 218 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 OR3A2P47893 321 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 AP3S2P59780 193 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 STK11Q15831 433 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms