RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PPP1R14AQ96A00 147 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 SYT4Q9H2B2 425 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 ADAM10O14672 748 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 EFSO43281 561 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 DUS4LO95620 317 aaKnown RBP16.67■□□□□ 0.26
PSPC1-201ENST00000338910 IGFBP3P17936 291 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-201ENST00000338910 VAMP1P23763 118 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 MEP1BQ16820 701 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 EMC4Q5J8M3 183 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 ZNF385CQ66K41 422 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-201ENST00000338910 NUP54Q7Z3B4 507 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 ASB5Q8WWX0 329 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 WDR77Q9BQA1 342 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-201ENST00000338910 SEBOXQ9HB31 216 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-201ENST00000338910 NIT2Q9NQR4 276 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 TAS2R4Q9NYW5 299 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 DHDHQ9UQ10 334 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 C5orf51A6NDU8 294 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 STK17BO94768 372 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 ERCC1P07992 297 aaPredicted RBP16.66■□□□□ 0.26
PSPC1-201ENST00000338910 SERPINF1P36955 418 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 TEX30Q5JUR7 227 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 OR10K2Q6IF99 312 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 MAMDC2Q7Z304 686 aaPredicted RBP16.66■□□□□ 0.26
PSPC1-201ENST00000338910 GRINAQ7Z429 371 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 ADAD2Q8NCV1 583 aaKnown RBP16.66■□□□□ 0.26
PSPC1-201ENST00000338910 NUDCD2Q8WVJ2 157 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 AQP3Q92482 292 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 SPSB2Q99619 263 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 NMES1Q9C002 83 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 HRH4Q9H3N8 390 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 SMCO4Q9NRQ5 59 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 WIPF3A6NGB9 483 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 VSTM2BA6NLU5 285 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 H0YIZ8 118 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 CBR1P16152 277 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 SLC26A5P58743 744 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 C1orf140Q5VVS0 124 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 OTPQ5XKR4 325 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 TMPPEQ6ZT21 453 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 CPEB2Q7Z5Q1 589 aaKnown RBP16.66■□□□□ 0.26
PSPC1-201ENST00000338910 C15orf54Q8N8G6 183 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 RNF128Q8TEB7 428 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 SMIM8Q96KF7 97 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 CMKLR1Q99788 373 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 SEC61A2Q9H9S3 476 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 CKLFQ9UBR5 152 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 PCDHGA1Q9Y5H4 931 aa16.66■□□□□ 0.26
PSPC1-201ENST00000338910 A8MVM7 634 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 SFTA3P0C7M3 94 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 ZNF44P15621 663 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 FSTP19883 344 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 SLC6A9P48067 706 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 DUSP3P51452 185 aaPredicted RBP16.65■□□□□ 0.26
PSPC1-201ENST00000338910 RBM39Q14498 530 aaKnown RBP16.65■□□□□ 0.26
PSPC1-201ENST00000338910 SMCO1Q147U7 214 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 EIF2S3LQ2VIR3 472 aaKnown RBP16.65■□□□□ 0.26
PSPC1-201ENST00000338910 SLC35D2Q76EJ3 337 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 SAT2Q96F10 170 aaPredicted RBP16.65■□□□□ 0.26
PSPC1-201ENST00000338910 GTF2A1LQ9UNN4 478 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 C13orf42A0A1B0GVH6 325 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 C1orf196B1AJZ1 125 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 NTN3O00634 580 aaPredicted RBP16.65■□□□□ 0.26
PSPC1-201ENST00000338910 NPIPB7O75200 414 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 RENP00797 406 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 FJX1Q86VR8 437 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 OR51A2Q8NGJ7 313 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 NUBPLQ8TB37 319 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 ADAMTS17Q8TE56 1095 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 FOXN4Q96NZ1 517 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 OR51M1Q9H341 326 aa16.65■□□□□ 0.26
PSPC1-201ENST00000338910 DCDC2BA2VCK2 349 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 RNASEK-C17orf49H0YIS7 233 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 SP9P0CG40 484 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 AKR1C4P17516 323 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 CX3CR1P49238 355 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ZNF600Q6ZNG1 722 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 NAA40Q86UY6 237 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ZNF679Q8IYX0 411 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 KDM8Q8N371 416 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 GVQW1Q8N7I0 195 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ZNF775Q96BV0 537 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ARRDC1-AS1Q9H2J1 176 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 FN3KRPQ9HA64 309 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 VDAC3Q9Y277 283 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 MSGN1A6NI15 193 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 XKRYO14609 159 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 MT-ATP6P00846 226 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 CD2P06729 351 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 CCL4P13236 92 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 MFGE8Q08431 387 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-201ENST00000338910 C17orf67Q0P5P2 114 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ACKR1Q16570 336 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 SGCBQ16585 318 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ZNF260Q3ZCT1 412 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 OR52W1Q6IF63 320 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 ACBD4Q8NC06 268 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 PTX4Q96A99 478 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 C14orf79Q96F83 325 aa16.64■□□□□ 0.25
PSPC1-201ENST00000338910 CDC6Q99741 560 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms