RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RELL2Q8NC24 303 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 MARCH1Q8TCQ1 289 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 CCDC120Q96HB5 630 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 SIGLEC12Q96PQ1 595 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 CST11Q9H112 138 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 WDR54Q9H977 334 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 PIGLQ9Y2B2 252 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 PCNX2A6NKB5 2137 aa7.77□□□□□ -1.16
SNCA-201ENST00000336904 ATMQ13315 3056 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 LOC102723996A0A087X1L8 192 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 C19orf67A6NJJ6 358 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 EEF1E1-BLOC1S5C9J1V9 151 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 I3L521 148 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 LDLRAD4O15165 306 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ZNF735P0CB33 412 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 TAS2R19P59542 299 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 MRPS10P82664 201 aaKnown RBP7.77□□□□□ -1.17
SNCA-201ENST00000336904 PPP1R1AQ13522 171 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 TGIF1Q15583 401 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ZNF260Q3ZCT1 412 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ACER2Q5QJU3 275 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 STEAP2Q8NFT2 490 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 PAQR8Q8TEZ7 354 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 CXorf58Q96LI9 332 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 PDCD10Q9BUL8 212 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ANGPTL4Q9BY76 406 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 FN3KRPQ9HA64 309 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 IL17BQ9UHF5 180 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 OPN4Q9UHM6 478 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 C13orf42A0A1B0GVH6 325 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 METTL21EPA6NDL7 271 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 F5H5P2 479 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 GABRA1P14867 456 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 MSR1P21757 451 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ACKR3P25106 362 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 RBMXP38159 391 aaKnown RBP7.77□□□□□ -1.17
SNCA-201ENST00000336904 DSCR4P56555 118 aaPredicted RBP7.77□□□□□ -1.17
SNCA-201ENST00000336904 CLDN15P56746 228 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ACTBP60709 375 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ACTG1P63261 375 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 DHRS2Q13268 280 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ARFRP1Q13795 201 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 GK2Q14410 553 aaPredicted RBP7.77□□□□□ -1.17
SNCA-201ENST00000336904 ZMYND11Q15326 602 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 SLC9A3R2Q15599 337 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 THOC7Q6I9Y2 204 aaKnown RBP7.77□□□□□ -1.17
SNCA-201ENST00000336904 SEZ6L2Q6UXD5 910 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 LYPD6Q86Y78 171 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 NABP1Q96AH0 204 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 MRI1Q9BV20 369 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 LPAR5Q9H1C0 372 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 ITGB1BP2Q9UKP3 347 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 HDGFL3Q9Y3E1 203 aa7.77□□□□□ -1.17
SNCA-201ENST00000336904 IGLV3-32A0A0A0MS00 114 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 IGHV3-64DA0A0J9YX35 117 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 C9orf172C9J069 976 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 DHHO43323 396 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 PPP3CBP16298 524 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 DLSTP36957 453 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 EIF1P41567 113 aaKnown RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 TMEM50BP56557 158 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 CARD18P57730 90 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 H3F3AP84243 136 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 EXT1Q16394 746 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 C1orf100Q5SVJ3 147 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 BHLHE23Q8NDY6 225 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 OR51T1Q8NGJ9 327 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 OR10D3Q8NH80 312 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 ZBTB8AQ96BR9 441 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 DMRTA2Q96SC8 542 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 ZNF701Q9NV72 531 aaPredicted RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 LRRC3CA6NJW4 275 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 HSPB2A8KAH6 182 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 MPTX1A8MV57 137 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 M0R135 149 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 ETV2O00321 342 aaPredicted RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 CDC14BO60729 498 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 PRAF2O60831 178 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 NFYAP23511 347 aaPredicted RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 ITGA3P26006 1051 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 QRFPP83859 136 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 HSPB2Q16082 182 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 C6orf201Q7Z4U5 140 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 COMMD7Q86VX2 200 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 FOXRED2Q8IWF2 684 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 TMEM123Q8N131 208 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 ARMC10Q8N2F6 343 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 OR10R2Q8NGX6 335 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 ZNF799Q96GE5 643 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 TMEM59Q9BXS4 323 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 RDH8Q9NYR8 311 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 NXT1Q9UKK6 140 aaKnown RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 AKAP13Q12802 2813 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 LGALS8O00214 317 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 TLX3O43711 291 aaPredicted RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 LCATP04180 440 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 DUSP3P51452 185 aaPredicted RBP7.76□□□□□ -1.17
SNCA-201ENST00000336904 RAG2P55895 527 aa7.76□□□□□ -1.17
SNCA-201ENST00000336904 SRSF6Q13247 344 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms