RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TNK1Q13470 666 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR8B8Q15620 311 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 TMEM244Q5VVB8 128 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF773Q6PK81 442 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 DOK3Q7L591 496 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZCCHC24Q8N2G6 241 aaKnown RBP12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 CXorf56Q9H5V9 222 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 CGGBP1Q9UFW8 167 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 CACNA1DQ01668 2161 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 PNMA8CA0A1B0GUJ8 204 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZSCAN5BA6NJL1 495 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 TMEM212A6NML5 194 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 SPRY3O43610 288 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 MTRF1O75570 445 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 DHRS3O75911 302 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZFPL1O95159 310 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ISG15P05161 165 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ATP6V1B1P15313 513 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 CCL1P22362 96 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ACKR3P25106 362 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 EMX1Q04741 257 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 SLC3A1Q07837 685 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 RIPPLY1Q0D2K3 151 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 TBCEQ15813 527 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZMAT1Q5H9K5 638 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 DMKNQ6E0U4 476 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 Q6ZR03 302 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 CDH24Q86UP0 819 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 SPARTQ8N0X7 666 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 PLPP7Q8NBV4 271 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 CSNK2A3Q8NEV1 391 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 SEMA6DQ8NFY4 1073 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR5AK2Q8NH90 309 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 RPS4Y2Q8TD47 263 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 PDCD1LG2Q9BQ51 273 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 COMMD4Q9H0A8 199 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 TPK1Q9H3S4 243 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 MS4A5Q9H3V2 200 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 ACOT13Q9NPJ3 140 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 TMEM100Q9NV29 134 aa12.01□□□□□ -0.49
APOBEC3B-202ENST00000335760 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 ASH1LQ9NR48 2969 aaKnown RBP12□□□□□ -0.49
APOBEC3B-202ENST00000335760 LOC390937A0A1W2PQ73 354 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 TRIM64A6NGJ6 449 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 ANKRD30BLA7E2S9 258 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 C17orf100A8MU93 164 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 H7C417 338 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 HSMCR30P0CW71 290 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 ACHEP22303 614 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 CA6P23280 308 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 ACSM1Q08AH1 577 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 TSTQ16762 297 aaKnown RBP12□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR2Z1Q8NG97 314 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR14K1Q8NGZ2 314 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 NINJ1Q92982 152 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 SMIM19Q96E16 107 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 NR1H4Q96RI1 486 aaPredicted RBP12□□□□□ -0.49
APOBEC3B-202ENST00000335760 SLC30A2Q9BRI3 323 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 MRPL15Q9P015 296 aaKnown RBP12□□□□□ -0.49
APOBEC3B-202ENST00000335760 PIGLQ9Y2B2 252 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 RHBDD3Q9Y3P4 386 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 V9GYS6 101 aa12□□□□□ -0.49
APOBEC3B-202ENST00000335760 ARFGEF3Q5TH69 2177 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 APCP25054 2843 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 A6NIN4 97 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 H0YL77 283 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 LMX1BO60663 402 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 IGHV1-46P01743 117 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 HLA-DPB1P04440 258 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ERCC1P07992 297 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 RPSAP08865 295 aaKnown RBP11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 FAHP16930 419 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF12P17014 697 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 CELP19835 753 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 BDH1Q02338 343 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR8G1Q15617 311 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 Q6ZSR3 168 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF367Q7RTV3 350 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 FTMTQ8N4E7 242 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 CCDC54Q8NEL0 328 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR10AC1Q8NH08 325 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 GHSRQ92847 366 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ITFG2Q969R8 447 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 TRMT61AQ96FX7 289 aaKnown RBP11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 SORCS2Q96PQ0 1159 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF696Q9H7X3 374 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 BEX4Q9NWD9 120 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZDHHC8Q9ULC8 765 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 HHLA2Q9UM44 414 aa11.99□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF816-ZNF321PA0A0X1KG74 233 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 MLNRO43193 412 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PLPP2O43688 288 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 NDUFS7O75251 213 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 CST4P01036 141 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PCMT1P22061 227 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms