RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NDUFB7P17568 137 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 OR8G1Q15617 311 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 RTL8BQ17RB0 113 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 PRSS3P2Q8NHM4 247 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 NEURL1O76050 574 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 CER1O95813 267 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 TSPAN12O95859 305 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 PTHLHP12272 177 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 OR10J1P30954 320 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 CDC34P49427 236 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 HLA-DRB3P79483 266 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 ABHD17CQ6PCB6 329 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 CYSLTR2Q9NS75 346 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 SLC5A6Q9Y289 635 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 RAB29O14966 203 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 STAG3L2P0CL84 134 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 LIM2P55344 173 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 ACSM6Q6P461 480 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 DPPA3Q6W0C5 159 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 HTR3DQ70Z44 454 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 DND1Q8IYX4 353 aaKnown RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 ARHGEF39Q8N4T4 335 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 DUSP18Q8NEJ0 188 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 THOC3Q96J01 351 aaKnown RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 SNX22Q96L94 193 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 UQCC1Q9NVA1 299 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 H3BNC9 293 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 EMC4Q5J8M3 183 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 XAF1Q6GPH4 301 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 TNFRSF19Q9NS68 423 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 SLCO1C1Q9NYB5 712 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 FKBP11Q9NYL4 201 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 LPAR3Q9UBY5 353 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 IGHV3-64DA0A0J9YX35 117 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 DUS4LO95620 317 aaKnown RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 IGHV3-9P01782 118 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 NPPBP16860 134 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 AGFG1P52594 562 aaKnown RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 CSNK1G2P78368 415 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 WDR73Q6P4I2 378 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 SPICQ8N5J4 248 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 MENTQ9BUN1 341 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF552Q9H707 407 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 Q9N2K0 584 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF195O14628 629 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 TNFRSF10CO14798 259 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 GEMIN2O14893 280 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 CEBPBP17676 345 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 FGF8P55075 233 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 LGALS4P56470 323 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SP6Q3SY56 376 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 TRMT12Q53H54 448 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 ST6GAL2Q96JF0 529 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 FAAP24Q9BTP7 215 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 LSM2Q9Y333 95 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 NRASP01111 189 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 FPR2P25090 351 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SELENOPP49908 381 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 GNG4P50150 75 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SUCLG1P53597 346 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 WDR61Q9GZS3 305 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 ARRDC5A6NEK1 342 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 NCBP2LA6PVI3 153 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 CRYBA1P05813 215 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 FBP1P09467 338 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 ELOBQ15370 118 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 LILRA3Q8N6C8 439 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 PDXPQ96GD0 296 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 TMEM218A2RU14 115 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 BMP5P22003 454 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 HTR1DP28221 377 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 CXCL12P48061 93 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 MAML2Q8IZL2 1156 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SIRT6Q8N6T7 355 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SDF2Q99470 211 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 LPAR5Q9H1C0 372 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 MAP1LC3B2A6NCE7 125 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 CD46P15529 392 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 RFC3P40938 356 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 EIF1P41567 113 aaKnown RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SPCS3P61009 180 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 GNB2P62879 340 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 TMPRSS11FQ6ZWK6 438 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 OR10X1Q8NGY0 326 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 SIGLEC11Q96RL6 698 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 HES7Q9BYE0 225 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 MAP1LC3BQ9GZQ8 125 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 ING1Q9UK53 422 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-201ENST00000334504 DUXBA0A1W2PPF3 345 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 GPANK1O95872 356 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 CD96P40200 585 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 RAB32Q13637 225 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 PNLIPRP3Q17RR3 467 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 ZDHHC22Q8N966 263 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 OR5D13Q8NGL4 314 aa8.87□□□□□ -0.99
COL4A6-201ENST00000334504 NTNG2Q96CW9 530 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms