RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RPS4Y2Q8TD47 263 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 RPL3LQ92901 407 aaKnown RBP14.19□□□□□ -0.14
SHOX-201ENST00000334060 FAM71F1Q96KD3 344 aaPredicted RBP14.19□□□□□ -0.14
SHOX-201ENST00000334060 PSMG3-AS1Q96PY0 264 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 MMP27Q9H306 513 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 GPR84Q9NQS5 396 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 E7EQL1 145 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 OGG1O15527 345 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 UPK1BO75841 260 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 THBS4P35443 961 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 FABP6P51161 128 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 GBX2P52951 348 aaPredicted RBP14.18□□□□□ -0.14
SHOX-201ENST00000334060 DEFA1P59665 94 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 DEFA3P59666 94 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ECH1Q13011 328 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 C6orf183Q5T699 404 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 BCL2L15Q5TBC7 163 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ASPHD2Q6ICH7 369 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 RHOUQ7L0Q8 258 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ELMOD2Q8IZ81 293 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 WACQ9BTA9 647 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 TRIM36Q9NQ86 728 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 NUFIP1Q9UHK0 495 aaKnown RBP14.18□□□□□ -0.14
SHOX-201ENST00000334060 SF3B6Q9Y3B4 125 aaKnown RBP14.18□□□□□ -0.14
SHOX-201ENST00000334060 KLF2Q9Y5W3 355 aaPredicted RBP14.18□□□□□ -0.14
SHOX-201ENST00000334060 LOC107986453A0A1B0GWG9 222 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 CRYAAP02489 173 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 SOX2P48431 317 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 PPP1CBP62140 327 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ZNF45Q02386 682 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 RIPPLY1Q0D2K3 151 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 RNF144BQ7Z419 303 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 OR5AS1Q8N127 324 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 TMEM171Q8WVE6 324 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 SMIM19Q96E16 107 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 LRRC46Q96FV0 321 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 SYT3Q9BQG1 590 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ATPIF1Q9UII2 106 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 POLQO75417 2590 aa14.18□□□□□ -0.14
SHOX-201ENST00000334060 ACOD1A6NK06 481 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 NOTOA8MTQ0 251 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 PTAFRP25105 342 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 SYT6Q5T7P8 510 aaPredicted RBP14.17□□□□□ -0.14
SHOX-201ENST00000334060 NRGNQ92686 78 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 MARS2Q96GW9 593 aaKnown RBP14.17□□□□□ -0.14
SHOX-201ENST00000334060 REEP6Q96HR9 211 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 NIPAL2Q9H841 368 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 ATP23Q9Y6H3 246 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 ABCA12Q86UK0 2595 aa14.17□□□□□ -0.14
SHOX-201ENST00000334060 FAM25AB3EWG3 89 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 FAM25CB3EWG5 89 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 FAM25GB3EWG6 89 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 IGLV3-1P01715 115 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 APOA1P02647 267 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 TACSTD2P09758 323 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 MLLT11Q13015 90 aaPredicted RBP14.16□□□□□ -0.14
SHOX-201ENST00000334060 OR2T2Q6IF00 324 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 FDX2Q6P4F2 183 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 KCTD20Q7Z5Y7 419 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 COMMD2Q86X83 199 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 ZNF295-AS1Q8N0V1 137 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 ZCCHC24Q8N2G6 241 aaKnown RBP14.16□□□□□ -0.14
SHOX-201ENST00000334060 KLF14Q8TD94 323 aaPredicted RBP14.16□□□□□ -0.14
SHOX-201ENST00000334060 OR51E2Q9H255 320 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 NEK6Q9HC98 313 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 POU2F3Q9UKI9 436 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 IGHV3-64DA0A0J9YX35 117 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 C3orf80F5H4A9 247 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 ALX3O95076 343 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 TRAPPC2P0DI81 140 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 TRAPPC2BP0DI82 140 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 M6PRP20645 277 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 DCTDP32321 178 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 TGM4P49221 684 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 RGS6P49758 472 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 FAM3AP98173 230 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 FABP5Q01469 135 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 PSG7Q13046 419 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 BEX5Q5H9J7 111 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 ZNF544Q6NX49 715 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 RPL22L1Q6P5R6 122 aaKnown RBP14.16□□□□□ -0.14
SHOX-201ENST00000334060 TMEM91Q6ZNR0 172 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 IQCF2Q8IXL9 164 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 ZNF676Q8N7Q3 588 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 DYNC2LI1Q8TCX1 351 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 CAPSLQ8WWF8 208 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 APOBEC3DQ96AK3 386 aaPredicted RBP14.16□□□□□ -0.14
SHOX-201ENST00000334060 CMBLQ96DG6 245 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 OR14A2Q96R54 314 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 MRPL37Q9BZE1 423 aaKnown RBP14.16□□□□□ -0.14
SHOX-201ENST00000334060 CA10Q9NS85 328 aa14.16□□□□□ -0.14
SHOX-201ENST00000334060 hCG_38984A0A1B0GV85 526 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 SHISA3A0PJX4 238 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 CASKO14936 926 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 PLPP2O43688 288 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 CPEP16870 476 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 GADD45AP24522 165 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 GNG2P59768 71 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 IFITM2Q01629 132 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms