RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MMP7P09237 267 aaPredicted RBP12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 PF4V1P10720 104 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 GSTM3P21266 225 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 GSSP48637 474 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 NPY4RP50391 375 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 PABPC1L2AQ5JQF8 200 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 FAM201AQ5SY85 155 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 ARL9Q6T311 187 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 ADAMTSL5Q6ZMM2 481 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 FAM122BQ7Z309 247 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 ASCL2Q99929 193 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 CHID1Q9BWS9 393 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 OR52D1Q9H346 318 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 RERGLQ9H628 205 aa12.07□□□□□ -0.48
CTHRC1-201ENST00000330295 LOC100509620A0A075B734 347 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 ACOT8O14734 319 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 ARPC3O15145 178 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 SLC16A7O60669 478 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 CST1P01037 141 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 PF4P02776 101 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 LAP3P28838 519 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 PSMB10P40306 273 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 CENPAP49450 140 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 GDI2P50395 445 aaKnown RBP12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 ARHGDIAP52565 204 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 ARF6P62330 175 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 BNIP1Q12981 228 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 MESTQ5EB52 335 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 ZFAND6Q6FIF0 208 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 SYT9Q86SS6 491 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 GLB1L2Q8IW92 636 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 RASD2Q96D21 266 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 POLE4Q9NR33 117 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 UGT2A1Q9Y4X1 527 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 MAB21L2Q9Y586 359 aa12.06□□□□□ -0.48
CTHRC1-201ENST00000330295 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 H7C1C5 153 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 E2F6O75461 281 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 PAHP00439 452 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 ZNF26P17031 533 aaPredicted RBP12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 LCN6P62502 163 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 SCRN3Q0VDG4 424 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 MICAQ29983 383 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 FOXL2NBQ6ZUU3 175 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 CLDN22Q8N7P3 220 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 DTX3Q8N9I9 347 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 WIPF2Q8TF74 440 aaPredicted RBP12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 GPR61Q9BZJ8 451 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 SYT4Q9H2B2 425 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 MMADHCQ9H3L0 296 aaPredicted RBP12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 SERTAD4Q9NUC0 356 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 VSX1Q9NZR4 365 aaPredicted RBP12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 POLR1DQ9Y2S0 133 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 CDH10Q9Y6N8 788 aa12.05□□□□□ -0.48
CTHRC1-201ENST00000330295 IGKV1D-43A0A0B4J1Z2 117 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 H3BUX3 64 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 GSC2O15499 205 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 ICMTO60725 284 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 FAHP16930 419 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 ZNF32P17041 273 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 SLC36A3Q495N2 470 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 RASSF6Q6ZTQ3 369 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 VMO1Q7Z5L0 202 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 ADGRG5Q8IZF4 528 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 C1orf87Q8N0U7 546 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 AQP11Q8NBQ7 271 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 OR4C15Q8NGM1 316 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 GIPC3Q8TF64 312 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 CANT1Q8WVQ1 401 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 SLC7A6OSQ96CW6 309 aaPredicted RBP12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 NPFFR1Q9GZQ6 430 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 ZNF556Q9HAH1 456 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 RAB18Q9NP72 206 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 TBC1D23Q9NUY8 699 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 NDRG4Q9ULP0 352 aaKnown RBP12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 BAIAP2Q9UQB8 552 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 U3KQV3 271 aa12.04□□□□□ -0.48
CTHRC1-201ENST00000330295 LRRC30A6NM36 301 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 GASTP01350 101 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 CHRM2P08172 466 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 CTLA4P16410 223 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 KITLGP21583 273 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 LSM6P62312 80 aaKnown RBP12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 PSG4Q00888 419 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 AQP6Q13520 282 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 LY6EQ16553 131 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 CLEC12AQ5QGZ9 265 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 OR10G2Q8NGC3 310 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 OR9Q2Q8NGE9 314 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 OR4K13Q8NH42 304 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 DGCR6LQ9BY27 220 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 NUAK2Q9H093 628 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 ELOVL3Q9HB03 270 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 INPP5EQ9NRR6 644 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms