RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 S100A14Q9HCY8 104 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 PNRC2Q9NPJ4 139 aaKnown RBP11.8□□□□□ -0.52
RPP40-201ENST00000319533 CTSZQ9UBR2 303 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 CYB5R1Q9UHQ9 305 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 A0A0G2JK05 382 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 CENPVL3A0A0U1RRI6 287 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 FKBP6O75344 327 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 CRYBA1P05813 215 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 ZNF823P16415 610 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 GGT2P36268 569 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 RIPK1Q13546 671 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 RCN1Q15293 331 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 MPPED2Q15777 294 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 KCNJ8Q15842 424 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 C11orf91Q3C1V1 193 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 CD300LDQ6UXZ3 194 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 LNX2Q8N448 690 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 OR8D4Q8NGM9 314 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 OR2AJ1Q8NGZ0 328 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 DUS3LQ96G46 650 aaKnown RBP11.79□□□□□ -0.52
RPP40-201ENST00000319533 FEVQ99581 238 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 ATF6BQ99941 703 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 SLC22A4Q9H015 551 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 MARCH7Q9H992 704 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 ZNF556Q9HAH1 456 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 ARMC1Q9NVT9 282 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 DNAJB9Q9UBS3 223 aa11.79□□□□□ -0.52
RPP40-201ENST00000319533 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
RPP40-201ENST00000319533 RIIAD1A6NNX1 92 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 H3BN98 237 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 LGALS8O00214 317 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 NDUFA2O43678 99 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 SFTPBP07988 381 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 ZNF3P17036 446 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 KRTAP10-3P60369 221 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 MALLQ13021 153 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 PRAMEF6Q5VXH4 476 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 NAA40Q86UY6 237 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 CYB561A3Q8NBI2 242 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 SLC37A3Q8NCC5 494 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 C19orf18Q8NEA5 215 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 SSMEM1Q8WWF3 244 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 NIPSNAP1Q9BPW8 284 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 PCGF1Q9BSM1 259 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 MMP27Q9H306 513 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 RNPEPL1Q9HAU8 725 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 ERVK-18Q9QC07 812 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 KCNG2Q9UJ96 466 aa11.78□□□□□ -0.52
RPP40-201ENST00000319533 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 F5H5K5 113 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 M0QZ24 198 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 TIMM23O14925 209 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 GMDSO60547 372 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 CLPXO76031 633 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 TOX4O94842 621 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 LCATP04180 440 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 PYCR1P32322 319 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
RPP40-201ENST00000319533 CRMP1Q14194 572 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 PDCD1Q15116 288 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 PGAP1Q75T13 922 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 LDLRAD3Q86YD5 345 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 LINC00346Q8IVM7 164 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 C10orf67Q8IYJ2 551 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 PAPD5Q8NDF8 572 aaKnown RBP11.77□□□□□ -0.53
RPP40-201ENST00000319533 OR4Q3Q8NH05 313 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 SPRYD4Q8WW59 207 aaPredicted RBP11.77□□□□□ -0.53
RPP40-201ENST00000319533 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 DYRK2Q92630 601 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 STMN2Q93045 179 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 TECTBQ96PL2 329 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 PITX2Q99697 317 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 FN3KRPQ9HA64 309 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 TRIM36Q9NQ86 728 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 ACOXLQ9NUZ1 547 aa11.77□□□□□ -0.53
RPP40-201ENST00000319533 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 FCN3O75636 299 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 TIPRLO75663 272 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 ANXA8P13928 327 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 CA6P23280 308 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 POU1F1P28069 291 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
RPP40-201ENST00000319533 GRK5P34947 590 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 BLVRAP53004 296 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 SLC25A1P53007 311 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 TPTEP56180 551 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 PROK1P58294 105 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 OR8G1Q15617 311 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 PNLDC1Q8NA58 520 aaKnown RBP11.76□□□□□ -0.53
RPP40-201ENST00000319533 OR9Q1Q8NGQ5 310 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms