RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 HPNP05981 417 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 BRS3P32247 399 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 MMP16P51512 607 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ROM1Q03395 351 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 EDDM3AQ14507 147 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC22A6Q4U2R8 563 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 INO80CQ6PI98 192 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TRAT1Q6PIZ9 186 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 OR5D13Q8NGL4 314 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SIGLEC11Q96RL6 698 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 EMC6Q9BV81 110 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 FAM234AQ9H0X4 552 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ASH2LQ9UBL3 628 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RHBDD3Q9Y3P4 386 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 IGHV3-15A0A0B4J1V0 119 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF724A8MTY0 619 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SEMA7AO75326 666 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 TUBG1P23258 451 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 PDLIM4P50479 330 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 ASCL1P50553 236 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 FXYD6P3P58550 94 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 TMED4Q7Z7H5 227 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 BPIFB2Q8N4F0 458 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 DMBX1Q8NFW5 382 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 CCDC120Q96HB5 630 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 WDFY2Q96P53 400 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC6A7Q99884 636 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 TUBG2Q9NRH3 451 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF69Q9UC07 566 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 NUDT19A8MXV4 375 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 IFNA1P01562 189 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 THY1P04216 161 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SRMP19623 302 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 OPRL1P41146 370 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 PRRX1P54821 245 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 KDM8Q8N371 416 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 Q8N402 240 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 OR4A16Q8NH70 328 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 CREB3L1Q96BA8 519 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 JMJD8Q96S16 334 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 ACOXLQ9NUZ1 547 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 KIR2DS1A0A191URI9 304 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 KIR2DS4P43632 304 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 NHLH1Q02575 133 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 KIR2DS1Q14954 304 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 PLA1AQ53H76 456 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 UBE2NLQ5JXB2 153 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 COMTD1Q86VU5 262 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SPACA3Q8IXA5 215 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 OR1S1Q8NH92 325 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 TMEM45BQ96B21 275 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 WFDC6Q9BQY6 131 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 RNF122Q9H9V4 155 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 HRASLSQ9HDD0 168 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 MGAT4CQ9UBM8 478 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 IL17BQ9UHF5 180 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 MED6O75586 246 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 UPK1BO75841 260 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 NRASP01111 189 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 AZGP1P25311 298 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 PRSS3P35030 304 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SNCAP37840 140 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 SOWAHCQ53LP3 525 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 CLVS2Q5SYC1 327 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 FDX2Q6P4F2 183 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF519Q8TB69 540 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 MCHR2Q969V1 340 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 LPAR3Q9UBY5 353 aa7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 MRPS28Q9Y2Q9 187 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-201ENST00000317968 CTLA4P16410 223 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 TNFSF8P32971 234 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 CREB3L2Q70SY1 520 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 CDH26Q8IXH8 852 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 RNF133Q8WVZ7 376 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 REEP6Q96HR9 211 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 KCNK17Q96T54 332 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 NICN1Q9BSH3 213 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 UFSP2Q9NUQ7 469 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF224Q9NZL3 707 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 OR2AT4A6NND4 320 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 PROB1E7EW31 1015 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 AIPO00170 330 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 GPR137BO60478 399 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 PTAFRP25105 342 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 MPGP29372 298 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ECI1P42126 302 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 SSBP1Q04837 148 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 NHLRC1Q6VVB1 395 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 B3GLCTQ6Y288 498 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 KCTD9Q7L273 389 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM122BQ7Z309 247 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ST8SIA4Q92187 359 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 SCPEP1Q9HB40 452 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 NOX4Q9NPH5 578 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 C13orf42A0A1B0GVH6 325 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 CSF1P09603 554 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 CSF3P09919 207 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms