RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 SOX6P35712 828 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 GK2Q14410 553 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 ZNF672Q499Z4 452 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 COLCA1Q6ZS62 124 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 CATSPERDQ86XM0 798 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 OR5AS1Q8N127 324 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 SYS1Q8N2H4 156 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 OR2G2Q8NGZ5 317 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 KLF14Q8TD94 323 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 TMEM203Q969S6 136 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 CMBLQ96DG6 245 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 LYZL4Q96KX0 146 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 TMEM204Q9BSN7 226 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 TBCCD1Q9NVR7 557 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 SPEF1Q9Y4P9 236 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 TTRP02766 147 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 RPS19P39019 145 aaKnown RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 MMP16P51512 607 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 GBX2P52951 348 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 SLC3A1Q07837 685 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 RGS7BPQ6MZT1 257 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 KCTD20Q7Z5Y7 419 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 REEP6Q96HR9 211 aa15.6■□□□□ 0.09
HMGA1-201ENST00000311487 FAM71F1Q96KD3 344 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-201ENST00000311487 TRBV2A0A0J9YWF9 115 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 LILRA1O75019 489 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 GABRA5P31644 462 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 ADIPOQQ15848 244 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 OR2T2Q6IF00 324 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 Q6ZNX1 250 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 OR51A4Q8NGJ6 313 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 OR10AC1Q8NH08 325 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 GTF3AQ92664 365 aaKnown RBP15.59■□□□□ 0.09
HMGA1-201ENST00000311487 MARS2Q96GW9 593 aaKnown RBP15.59■□□□□ 0.09
HMGA1-201ENST00000311487 MRPL37Q9BZE1 423 aaKnown RBP15.59■□□□□ 0.09
HMGA1-201ENST00000311487 PPP1R3EQ9H7J1 279 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 NIPAL2Q9H841 368 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 GPR84Q9NQS5 396 aa15.59■□□□□ 0.09
HMGA1-201ENST00000311487 LMX1BO60663 402 aa15.58■□□□□ 0.09
HMGA1-201ENST00000311487 ZCCHC24Q8N2G6 241 aaKnown RBP15.58■□□□□ 0.09
HMGA1-201ENST00000311487 OR13C5Q8NGS8 318 aa15.58■□□□□ 0.09
HMGA1-201ENST00000311487 MRPL48Q96GC5 212 aaKnown RBP15.58■□□□□ 0.09
HMGA1-201ENST00000311487 DCLRE1CQ96SD1 692 aaKnown RBP15.58■□□□□ 0.09
HMGA1-201ENST00000311487 BARHL1Q9BZE3 327 aa15.58■□□□□ 0.09
HMGA1-201ENST00000311487 BCL2L14Q9BZR8 327 aa15.58■□□□□ 0.09
HMGA1-201ENST00000311487 OR10A2Q9H208 303 aa15.58■□□□□ 0.09
HMGA1-201ENST00000311487 hCG_2014768A0A024R1R8 64 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 FAM221AA4D161 298 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 ZFPL1O95159 310 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 ZNF12P17014 697 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 CELP19835 753 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 GLRXP35754 106 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 PSG7Q13046 419 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 ALKBH1Q13686 389 aaKnown RBP15.58■□□□□ 0.08
HMGA1-201ENST00000311487 C22orf42Q6IC83 251 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 CD200R1LQ6Q8B3 271 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 NUP37Q8NFH4 326 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 ST6GALNAC2Q9UJ37 374 aa15.58■□□□□ 0.08
HMGA1-201ENST00000311487 CACNA1DQ01668 2161 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 A0A075B6Q4 140 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 APOC1P02654 83 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 SOD3P08294 240 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 DCTDP32321 178 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 RBMXP38159 391 aaKnown RBP15.57■□□□□ 0.08
HMGA1-201ENST00000311487 ALDH3B1P43353 468 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 FABP5Q01469 135 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 MALLQ13021 153 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 INSL4Q14641 139 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 PGAP1Q75T13 922 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 MRPL21Q7Z2W9 205 aaKnown RBP15.57■□□□□ 0.08
HMGA1-201ENST00000311487 ELMOD2Q8IZ81 293 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 OR52H1Q8NGJ2 320 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 TRIM36Q9NQ86 728 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 NUFIP1Q9UHK0 495 aaKnown RBP15.57■□□□□ 0.08
HMGA1-201ENST00000311487 LAMP3Q9UQV4 416 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 CMAHPQ9Y471 501 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 PEX16Q9Y5Y5 336 aa15.57■□□□□ 0.08
HMGA1-201ENST00000311487 CDRT1O95170 752 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 GCH1P30793 250 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 S100A5P33763 92 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 SERPINF1P36955 418 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 PPP5CP53041 499 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 IFITM3Q01628 133 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 BDH1Q02338 343 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 SNX29P2Q8IUI4 249 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 ZNF676Q8N7Q3 588 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 OR5L1Q8NGL2 311 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 SYNPRQ8TBG9 265 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 DVL3Q92997 716 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-201ENST00000311487 FBXW5Q969U6 566 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 SNTG1Q9NSN8 517 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 IGHV3-64DA0A0J9YX35 117 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 TRDV1A0A1B0GX56 115 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 OR4C45A6NMZ5 311 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 HS3ST1O14792 307 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 MAGEB3O15480 346 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 IL1AP01583 271 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 FGF9P31371 208 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-201ENST00000311487 FAM3AP98173 230 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 HNRNPA0Q13151 305 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms