RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ASCL1P50553 236 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 RPS18P62269 152 aaKnown RBP12.05□□□□□ -0.48
SEC23A-201ENST00000307712 CT45A2Q5DJT8 189 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 NCMAPQ5T1S8 102 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 CLEC18BQ6UXF7 455 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 C11orf40Q8WZ69 217 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 CLCC1Q96S66 551 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 NRIP2Q9BQI9 281 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 FBXL17Q9UF56 701 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 GBF1Q92538 1859 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 CST4P01036 141 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 DBHP09172 617 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 MUC1P15941 1255 aaPredicted RBP12.05□□□□□ -0.48
SEC23A-201ENST00000307712 IKZF1Q13422 519 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 PCK2Q16822 640 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 ROBO4Q8WZ75 1007 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 FGF11Q92914 225 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 SPTSSAQ969W0 71 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 PRRX2Q99811 253 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 SSX3Q99909 188 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 RAB18Q9NP72 206 aa12.05□□□□□ -0.48
SEC23A-201ENST00000307712 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 TAF9Q16594 264 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 BATF2Q8N1L9 274 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 STT3BQ8TCJ2 826 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 ZNF251Q9BRH9 671 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 ADAM11O75078 769 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 RPS4Y1P22090 263 aaKnown RBP12.04□□□□□ -0.48
SEC23A-201ENST00000307712 CLDN17P56750 224 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 DLX2Q07687 328 aaPredicted RBP12.04□□□□□ -0.48
SEC23A-201ENST00000307712 C4orf17Q53FE4 359 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 AWAT1Q58HT5 328 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 C9orf152Q5JTZ5 239 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 OR51F2Q8NH61 342 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 ZNF724A8MTY0 619 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 CNOT4O95628 575 aaKnown RBP12.04□□□□□ -0.48
SEC23A-201ENST00000307712 TNFRSF4P43489 277 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 C17orf67Q0P5P2 114 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 NR0B2Q15466 257 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 FAM109BQ6ICB4 259 aaPredicted RBP12.04□□□□□ -0.48
SEC23A-201ENST00000307712 C5orf46Q6UWT4 87 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 WWTR1Q9GZV5 400 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 METTL9Q9H1A3 318 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 DKKL1Q9UK85 242 aa12.04□□□□□ -0.48
SEC23A-201ENST00000307712 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 A0A1W2PPC1 479 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 SMCO3A2RU48 225 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 C7orf77A4D0Y5 90 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 SOCS1O15524 211 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 DUX1O43812 170 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 DDAH2O95865 285 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 OR5H8P0DN80 308 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 RCC1P18754 421 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 CDAP32320 146 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 GFERP55789 205 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 DHODHQ02127 395 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 FAM209BQ5JX69 171 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 PLXDC1Q8IUK5 500 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 SAT2Q96F10 170 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 PIGQQ9BRB3 760 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 ZNF426Q9BUY5 554 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 CHST11Q9NPF2 352 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 A0A087WZY1 265 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 TP53I11O14683 189 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 HIST1H1DP16402 221 aaKnown RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 EIF2S3P41091 472 aaKnown RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 RPL23AP62750 156 aaKnown RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 TMEM104Q8NE00 496 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 GFI1Q99684 422 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 MENTQ9BUN1 341 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 RAB33BQ9H082 229 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 MSTNO14793 375 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 IFNA10P01566 189 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 ZBTB25P24278 435 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 PIGPP57054 158 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 ZNF121P58317 390 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 MRPS34P82930 218 aaKnown RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 MALLQ13021 153 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 MFAP5Q13361 173 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 LGI3Q8N145 548 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 ZFP62Q8NB50 900 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-201ENST00000307712 SLC25A31Q9H0C2 315 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 PLEKHA2Q9HB19 425 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 ZNF286AQ9HBT8 521 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 PILRAQ9UKJ1 303 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 MMACHCQ9Y4U1 282 aa12.03□□□□□ -0.48
SEC23A-201ENST00000307712 TRBV5-7A0A0A0MS05 114 aa12.02□□□□□ -0.48
SEC23A-201ENST00000307712 TRAV14DV4A0A0A6YYC5 116 aa12.02□□□□□ -0.48
SEC23A-201ENST00000307712 TRBV11-1A0A0K0K1C0 115 aa12.02□□□□□ -0.48
SEC23A-201ENST00000307712 SHISA8B8ZZ34 492 aa12.02□□□□□ -0.48
SEC23A-201ENST00000307712 FPR2P25090 351 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms