RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DIRC2Q96SL1 478 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 FXYD6Q9H0Q3 95 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ACKR4Q9NPB9 350 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 SLC7A10Q9NS82 523 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 PLCXD1Q9NUJ7 323 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ETV7Q9Y603 341 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 CD300LBA8K4G0 201 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 MSTNO14793 375 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 RFPL3SP0C7P2 107 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF136P52737 540 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ACTBL2Q562R1 376 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 CMPK2Q5EBM0 449 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 CD300LDQ6UXZ3 194 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 MDP1Q86V88 176 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 OR1S1Q8NH92 325 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 HGDQ93099 445 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 KIRREL1Q96J84 757 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 FLVCR1Q9Y5Y0 555 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 DOCK4Q8N1I0 1966 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 E9PI62 339 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 APOA2P02652 100 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 PPP5CP53041 499 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 TAS2R31P59538 309 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 TNK1Q13470 666 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 CAMK2BQ13554 666 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 TSC22D1Q15714 1073 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 PRSS53Q2L4Q9 553 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 MESTQ5EB52 335 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 C12orf73Q69YU5 71 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ADAM5Q6NVV9 412 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 GPR137Q96N19 417 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 HRASLSQ9HDD0 168 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ONECUT1Q9UBC0 465 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 UPK3AO75631 287 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 AQP8O94778 261 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 LIPAP38571 399 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 MRPS34P82930 218 aaKnown RBP8.19□□□□□ -1.1
PTPRE-202ENST00000306042 PRDX4Q13162 271 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ATXN7L3Q14CW9 347 aaPredicted RBP8.19□□□□□ -1.1
PTPRE-202ENST00000306042 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ANKRD13BQ86YJ7 626 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 GABRG1Q8N1C3 465 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 MINDY2Q8NBR6 621 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 SCGB1C1Q8TD33 95 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 SPSB1Q96BD6 273 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 NTN4Q9HB63 628 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 C1orf123Q9NWV4 160 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 TRGV10A0A0A0MS01 117 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 TUSC2O75896 110 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 DHRS3O75911 302 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 EIF4EP06730 217 aaKnown RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 HLA-DOBP13765 273 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ATF1P18846 271 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CDK2P24941 298 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 SERPINF1P36955 418 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CSRP3P50461 194 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF92Q03936 586 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CEBPEQ15744 281 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 TFAP2EQ6VUC0 442 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 RPS2P15880 293 aaKnown RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 MSMO1Q15800 293 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 TAF9Q16594 264 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CCDC92Q53HC0 331 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 C6orf183Q5T699 404 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 C1orf174Q8IYL3 243 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 LRRC29Q8WV35 223 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 RPL3LQ92901 407 aaKnown RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 TRIM63Q969Q1 353 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CXXC4Q9H2H0 198 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ZMAT3Q9HA38 289 aaKnown RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ICE1Q9Y2F5 2266 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 NAP1L6A6NFF2 107 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CREBL2O60519 120 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 IFNA17P01571 189 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ADRB1P08588 477 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CELA3AP09093 270 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 SLC35A2P78381 396 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 LPCAT3Q6P1A2 487 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 C10orf111Q8N326 155 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 OR10J5Q8NHC4 309 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CREB3L1Q96BA8 519 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 PHB2Q99623 299 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CDCA4Q9BXL8 241 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 FGF20Q9NP95 211 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 CISD1Q9NZ45 108 aaKnown RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ST3GAL6Q9Y274 331 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 H3BMQ9 156 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 TGFBR3LH3BV60 316 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ASCL1P50553 236 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 GSG1LQ6UXU4 331 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 APOOLQ6UXV4 268 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 ADPRHL1Q8NDY3 354 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 NFAM1Q8NET5 270 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-202ENST00000306042 THAP7Q9BT49 309 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms