RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TNXAQ16473 311 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PABPC1L2AQ5JQF8 200 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 FAM27D1Q5T7N8 215 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 BAGE3Q86Y29 109 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 BAGE2Q86Y30 109 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR5B3Q8NH48 314 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 HSD17B10Q99714 261 aaKnown RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 S1PR5Q9H228 398 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ASB4Q9Y574 426 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 GLI3P10071 1580 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 LRRC37A3O60309 1634 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 LRP5LA4QPB2 252 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 THBS3P49746 956 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PEA15Q15121 130 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 NKG7Q16617 165 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OSR2Q8N2R0 312 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR52I2Q8NH67 350 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 DHRS4Q9BTZ2 278 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ANKRD60Q9BZ19 345 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 C20orf85Q9H1P6 137 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 FAM53CQ9NYF3 392 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 SLC25A37Q9NYZ2 338 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PSENENQ9NZ42 101 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR1A1Q9P1Q5 309 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PSORS1C1Q9UIG5 152 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 S100A4P26447 101 aaKnown RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 RTL6Q6ICC9 239 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 CCDC190Q86UF4 302 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MCHR2Q969V1 340 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 A0A087WUJ7 227 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 PRSS44E7EML9 344 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 SLC16A6O15403 523 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 SBK3P0C264 359 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 CD80P33681 288 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM211Q6ICI0 200 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 CMIPQ8IY22 773 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 OR4S1Q8NGB4 309 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 HES4Q9HCC6 221 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 BIN3Q9NQY0 253 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 ACER3Q9NUN7 267 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 GAB2Q9UQC2 676 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 HILPDAQ9Y5L2 63 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MYH8P13535 1937 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 SULT1C2O00338 296 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 SPINT1O43278 529 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 NKX2-1P43699 371 aaPredicted RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 RFX2P48378 723 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 KCNIP4Q6PIL6 250 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 CYP4V2Q6ZWL3 525 aaPredicted RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 GALMQ96C23 342 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MRGPRX4Q96LA9 322 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 FAAP24Q9BTP7 215 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MS4A7Q9GZW8 240 aaPredicted RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 LIPGQ9Y5X9 500 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 PNLIPRP2P54317 469 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 TATDN3Q17R31 274 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF683Q8IZ20 524 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 ZCCHC14Q8WYQ9 949 aaKnown RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 ARPC5LQ9BPX5 153 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 PSD2Q9BQI7 771 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 REPIN1Q9BWE0 567 aaKnown RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 RAB40ALP0C0E4 278 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 PCK2Q16822 640 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 OR2T6Q8NHC8 308 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 RAB40AQ8WXH6 277 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 UNKLQ9H9P5 680 aaKnown RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MYOZ1Q9NP98 299 aaPredicted RBP6.99□□□□□ -1.29
SCN9A-201ENST00000303354 DUSP22Q9NRW4 184 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 IGHV3-72A0A0B4J1Y9 119 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 CCL3P10147 92 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 NTF3P20783 257 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 UBTD2Q8WUN7 234 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MAP6Q96JE9 813 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 TXNIPQ9H3M7 391 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 AGAP14A8MT82 685 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 HRH1P35367 487 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 OR4D9Q8NGE8 314 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 MARCH1Q8TCQ1 289 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 ADAM19Q9H013 955 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 INPP5EQ9NRR6 644 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 C20orf141Q9NUB4 165 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 TRAPPC4Q9Y296 219 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 CEPT1Q9Y6K0 416 aa6.99□□□□□ -1.29
SCN9A-201ENST00000303354 K7EQM0 130 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 TERTO14746 1132 aaKnown RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 NGFP01138 241 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ACKR3P25106 362 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 FAM74A1Q5RGS3 127 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 LSRQ86X29 649 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 GLTPQ9NZD2 209 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ARL2-SNX15V9GYD0 113 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 GYPAP02724 150 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 PLPP6Q8IY26 295 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ARHGEF39Q8N4T4 335 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 CSAG2Q9Y5P2 127 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 SP9P0CG40 484 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ERP29P30040 261 aaKnown RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 HBG1P69891 147 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 HBG2P69892 147 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF169Q14929 603 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms