RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MRPL22Q9NWU5 206 aaKnown RBP11.89□□□□□ -0.51
CASC4-201ENST00000299957 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 OR6C76A6NM76 312 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 RIN1Q13671 783 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 TSC22D1Q15714 1073 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
CASC4-201ENST00000299957 FAM181AQ8N9Y4 354 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 TMEM104Q8NE00 496 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 TERB2Q8NHR7 220 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 SCGB1C1Q8TD33 95 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 PTPMT1Q8WUK0 201 aaPredicted RBP11.88□□□□□ -0.51
CASC4-201ENST00000299957 SYT3Q9BQG1 590 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 CNTNAP3Q9BZ76 1288 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 TGFBR3LH3BV60 316 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 MASP2O00187 686 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 CDK2AP1O14519 115 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 EIF4E2O60573 245 aaKnown RBP11.88□□□□□ -0.51
CASC4-201ENST00000299957 CASRP41180 1078 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 RPS16P62249 146 aaKnown RBP11.88□□□□□ -0.51
CASC4-201ENST00000299957 FOXK1P85037 733 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 C19orf57Q0VDD7 668 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 IL10RAQ13651 578 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 RAB11FIP2Q7L804 512 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 NKAIN3Q8N8D7 197 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 SLCO5A1Q9H2Y9 848 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 ZCCHC4Q9H5U6 513 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 B3GALT5Q9Y2C3 310 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 PLXND1Q9Y4D7 1925 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 FER1L5A0AVI2 2057 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 KLF4O43474 513 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 SERPINE2P07093 398 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 ZNF728P0DKX0 622 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 NR2C1P13056 603 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 B4GALT1P15291 398 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 MRPS34P82930 218 aaKnown RBP11.88□□□□□ -0.51
CASC4-201ENST00000299957 C4orf17Q53FE4 359 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 AVPI1Q5T686 147 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 BVESQ8NE79 360 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 SGK3Q96BR1 496 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 SDSLQ96GA7 329 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 FN3KRPQ9HA64 309 aa11.88□□□□□ -0.51
CASC4-201ENST00000299957 C9orf170A2RU37 121 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 CST7O76096 145 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 BCKDHBP21953 392 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 GDF1P27539 372 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 RAG2P55895 527 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 SLC37A1P57057 533 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 DCDP81605 110 aaKnown RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 SKP2Q13309 424 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 CDC20BQ86Y33 519 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 SUMF2Q8NBJ7 301 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 OR5M9Q8NGP3 310 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 OR1S1Q8NH92 325 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 DYRK2Q92630 601 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 ADAT3Q96EY9 351 aaPredicted RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 MMACHCQ9Y4U1 282 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 LOC101059948A0A1B0GTJ6 334 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 BCL2L11O43521 198 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 UPK3AO75631 287 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 DDAH2O95865 285 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 NFYBP25208 207 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 SLC25A1P53007 311 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 GUCA2BQ16661 112 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 EMC4Q5J8M3 183 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 CLRN3Q8NCR9 226 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 GPBAR1Q8TDU6 330 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 CDCA3Q99618 268 aaPredicted RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 CACNA1BQ00975 2339 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 BLACEA4D250 179 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 OR5H15A6NDH6 313 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 MALLQ13021 153 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 GAB4Q2WGN9 574 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 ZNF660Q6AZW8 331 aaPredicted RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 AAED1Q7RTV5 226 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 OR51F2Q8NH61 342 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 NAA11Q9BSU3 229 aaPredicted RBP11.87□□□□□ -0.51
CASC4-201ENST00000299957 CALHM2Q9HA72 323 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 OR14J1Q9UGF5 321 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
CASC4-201ENST00000299957 OR5H8P0DN80 308 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 CD27P26842 260 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RPS11P62280 158 aaKnown RBP eCLIP11.86□□□□□ -0.51
CASC4-201ENST00000299957 PLP2Q04941 152 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ELFN2Q5R3F8 820 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ZNF100Q8IYN0 542 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 TMEM123Q8N131 208 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 C17orf78Q8N4C9 275 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SPICQ8N5J4 248 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SFT2D1Q8WV19 159 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RDH5Q92781 318 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RRNAD1Q96FB5 475 aaKnown RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms