RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 GPR132Q9UNW8 380 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 HIDE1A8MVS5 230 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 CYB5BO43169 146 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 NKX2-2O95096 273 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 CISD3P0C7P0 127 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 JMJD7P0C870 316 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 IGFBP3P17936 291 aaPredicted RBP11.99□□□□□ -0.49
SKA3-201ENST00000298260 PCK2Q16822 640 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 ADAMTSL4Q6UY14 1074 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 DPPA2Q7Z7J5 298 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 MFSD8Q8NHS3 518 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 MALSU1Q96EH3 234 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 OR2A5Q96R48 311 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 SERINC2Q96SA4 455 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 ABHD6Q9BV23 337 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 HIF3AQ9Y2N7 669 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 ARHGEF17Q96PE2 2063 aaPredicted RBP11.99□□□□□ -0.49
SKA3-201ENST00000298260 RAD51DO75771 328 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 COX5BP10606 129 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 CTLA4P16410 223 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 APLNRP35414 380 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 EIF5AL1Q6IS14 154 aaKnown RBP11.98□□□□□ -0.49
SKA3-201ENST00000298260 MED25Q71SY5 747 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 NAXEQ8NCW5 288 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 TAAR8Q969N4 342 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 THOC3Q96J01 351 aaKnown RBP11.98□□□□□ -0.49
SKA3-201ENST00000298260 C2orf50Q96LR7 162 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 CNTNAP3Q9BZ76 1288 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 LMAN1LQ9HAT1 526 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 PILRAQ9UKJ1 303 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 FBXL21Q9UKT6 434 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 MAFFQ9ULX9 164 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 LAMA1P25391 3075 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 A0A0A6YYD4 124 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 RPUSD3Q6P087 351 aaKnown RBP11.98□□□□□ -0.49
SKA3-201ENST00000298260 SFTPA2Q8IWL1 248 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 ZNF610Q8N9Z0 462 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 MUCL1Q96DR8 90 aa11.98□□□□□ -0.49
SKA3-201ENST00000298260 DOCK8Q8NF50 2099 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 A0A0A6YYH2 397 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 A6NJ64 397 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 CYR61O00622 381 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 RENP00797 406 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 SPCS3P61009 180 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 HNRNPA1L2Q32P51 320 aaKnown RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 PLAC9Q5JTB6 97 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 FAHD2BQ6P2I3 314 aaPredicted RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 ANGPTL5Q86XS5 388 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 ZNF101Q8IZC7 436 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 FAM160A2Q8N612 972 aaPredicted RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 TMEM156Q8N614 296 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 KREMEN2Q8NCW0 462 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 CPNE4Q96A23 557 aaPredicted RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 RAB7BQ96AH8 199 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 FAHD2AQ96GK7 314 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 REEP6Q96HR9 211 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 NELFAQ9H3P2 528 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 RAB18Q9NP72 206 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 TBC1D29Q9UFV1 150 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 RAB22AQ9UL26 194 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 MUC3AQ02505 3323 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 TGFBR3LH3BV60 316 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 EREGO14944 169 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 PPP1R2P9O14990 202 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 DIRAS3O95661 229 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 VIPR2P41587 438 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 SOHLH1Q5JUK2 328 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 OR2T2Q6IF00 324 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 OR10AD1Q8NGE0 317 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 OR13G1Q8NGZ3 307 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 ANKRD9Q96BM1 317 aaPredicted RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 TMEM68Q96MH6 324 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 GPX7Q96SL4 187 aaPredicted RBP11.97□□□□□ -0.49
SKA3-201ENST00000298260 NEU1Q99519 415 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 SLC35B3Q9H1N7 401 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 CENPMQ9NSP4 180 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 RHBDD3Q9Y3P4 386 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 SEC16AO15027 2179 aa11.97□□□□□ -0.49
SKA3-201ENST00000298260 SERINC4A6NH21 518 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 CDRT15L2A8MXV6 281 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 ZNF264O43296 627 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 FOXS1O43638 330 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.49
SKA3-201ENST00000298260 CATSPERDQ86XM0 798 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 RNASE11Q8TAA1 199 aaKnown RBP11.96□□□□□ -0.49
SKA3-201ENST00000298260 PMM1Q92871 262 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 RAB39BQ96DA2 213 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 ADAT3Q96EY9 351 aaPredicted RBP11.96□□□□□ -0.49
SKA3-201ENST00000298260 CDC6Q99741 560 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 TMEM14AQ9Y6G1 99 aa11.96□□□□□ -0.49
SKA3-201ENST00000298260 MYO7BQ6PIF6 2116 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms