RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 TRA2AQ13595 282 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 ENDOGQ14249 297 aaKnown RBP8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 GK2Q14410 553 aaPredicted RBP8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 LIN54Q6MZP7 749 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 LPCAT3Q6P1A2 487 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 ZNF546Q86UE3 836 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 RPS19BP1Q86WX3 136 aaKnown RBP8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 GJC3Q8NFK1 279 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 OR14K1Q8NGZ2 314 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 LRRC20Q8TCA0 184 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 SSC4DQ8WTU2 575 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 C17orf50Q8WW18 174 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 RBPMSQ93062 196 aaKnown RBP8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 TMEM54Q969K7 222 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 NABP1Q96AH0 204 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 RAB3CQ96E17 227 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 WBP1Q96G27 269 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 PGAM5Q96HS1 289 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 LYZL4Q96KX0 146 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 CXorf58Q96LI9 332 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 SH2D2AQ9NP31 389 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 HPF1Q9NWY4 346 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 ZNF224Q9NZL3 707 aa8.19□□□□□ -1.1
UBLCP1-201ENST00000296786 FREM1Q5H8C1 2179 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 hCG_1807616A0A1W2PRN6 198 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 C9orf170A2RU37 121 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 OR5H15A6NDH6 313 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ZSCAN5BA6NJL1 495 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 TNFSF11O14788 317 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CRTAPO75718 401 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 VAMP5O95183 116 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SPDEFO95238 335 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SLC34A2O95436 690 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 IFNA6P05013 189 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 HIST1H1DP16402 221 aaKnown RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 TBPP20226 339 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CTSSP25774 331 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 TMEM50BP56557 158 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 IL13RA1P78552 427 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ZNF468Q5VIY5 522 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 PEAR1Q5VY43 1037 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SIGIRRQ6IA17 410 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 TMEM123Q8N131 208 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ADAD2Q8NCV1 583 aaKnown RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 OR9K2Q8NGE7 335 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 OR5D18Q8NGL1 313 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 OR4K15Q8NH41 348 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SUN5Q8TC36 379 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 NPRL2Q8WTW4 380 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ST8SIA4Q92187 359 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 LIN37Q96GY3 246 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CCDC120Q96HB5 630 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SEC22AQ96IW7 307 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 PDCD10Q9BUL8 212 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 RBM24Q9BX46 236 aaKnown RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 C1QTNF6Q9BXI9 259 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 FN3KRPQ9HA64 309 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 A0A0J9YW62 118 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SCO1O75880 301 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CER1O95813 267 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 IL2RAP01589 272 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 IGLV3-1P01715 115 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 GSTP1P09211 210 aaKnown RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 AKR1C4P17516 323 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 AGTR1P30556 359 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CALCRP30988 508 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 FOLR3P41439 243 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 DUSP3P51452 185 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ZNF133P52736 654 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 MLF1P58340 268 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CSNK2A1P68400 391 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SRSF4Q08170 494 aaKnown RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 FGL1Q08830 312 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 MICBQ29980 383 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 TRIM61Q5EBN2 209 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ZNF660Q6AZW8 331 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 CRIP3Q6Q6R5 217 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 OR6K3Q8NGY3 331 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 MITD1Q8WV92 249 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 NTNG2Q96CW9 530 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 PHB2Q99623 299 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 NAA11Q9BSU3 229 aaPredicted RBP8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 REG4Q9BYZ8 158 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 SDHAF2Q9NX18 166 aa8.18□□□□□ -1.1
UBLCP1-201ENST00000296786 DHHO43323 396 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 LAMTOR5O43504 91 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 RAD51DO75771 328 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 VAMP1P23763 118 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 AVPR2P30518 371 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 ARPC4P59998 168 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 ECH1Q13011 328 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 KISS1Q15726 138 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 RSPO1Q2MKA7 263 aaPredicted RBP8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 RGS7BPQ6MZT1 257 aaPredicted RBP8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 FAHD2BQ6P2I3 314 aaPredicted RBP8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 FOXL2NBQ6ZUU3 175 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 SLC51BQ86UW2 128 aa8.17□□□□□ -1.1
UBLCP1-201ENST00000296786 DTX1Q86Y01 620 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms