RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 RRNAD1Q96FB5 475 aaKnown RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 SULT4A1Q9BR01 284 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 NAA11Q9BSU3 229 aaPredicted RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 TMPRSS5Q9H3S3 457 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 OR52A1Q9UKL2 312 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TMED7Q9Y3B3 224 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TIMM10BQ9Y5J6 103 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 KPTNQ9Y664 436 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ADAMTS9Q9P2N4 1935 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 MGAQ8IWI9 3026 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 LOC107986453A0A1B0GWG9 222 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 RAB27BO00194 218 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 ADAM10O14672 748 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 HCRTR2O43614 444 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 CLN5O75503 358 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 LYL1P12980 280 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 SERPINF1P36955 418 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 DNASE1L1P49184 302 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 SLC35D2Q76EJ3 337 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 SLC29A4Q7RTT9 530 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 OR13C3Q8NGS6 347 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 GPR119Q8TDV5 335 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 TAAR9Q96RI9 348 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 ADOQ96SZ5 270 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 ELF4Q99607 663 aaPredicted RBP9.23□□□□□ -0.93
SKA1-201ENST00000285116 LRRC61Q9BV99 259 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 KLHL13Q9P2N7 655 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 CACFD1Q9UGQ2 172 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 WIPF3A6NGB9 483 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 EFSO43281 561 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 MBTPS2O43462 519 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 STK17BO94768 372 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 HLA-DQA2P01906 255 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 ERCC1P07992 297 aaPredicted RBP9.23□□□□□ -0.93
SKA1-201ENST00000285116 FCGR3AP08637 254 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 OR8U8P0C7N1 319 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 THEGLP0DJG4 465 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 IL12BP29460 328 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 HGFACQ04756 655 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 NSUN5P2Q63ZY6 315 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 ZNF761Q86XN6 746 aaPredicted RBP9.23□□□□□ -0.93
SKA1-201ENST00000285116 OR4S1Q8NGB4 309 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 RNF133Q8WVZ7 376 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 ASB10Q8WXI3 467 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 OR5B2Q96R09 309 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 RPS10P5Q9NQ39 176 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 PIAS3Q9Y6X2 628 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 SPTBN4Q9H254 2564 aa9.23□□□□□ -0.93
SKA1-201ENST00000285116 TCRBV21S2A2A0A5A6 115 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 GLP1RP43220 463 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 DVL1P1P54792 670 aaPredicted RBP9.22□□□□□ -0.93
SKA1-201ENST00000285116 HYAL4Q2M3T9 481 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 C1QL3Q5VWW1 255 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 OR52W1Q6IF63 320 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 DHRS11Q6UWP2 260 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 NUBPLQ8TB37 319 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 FAM46BQ96A09 425 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 FBXO17Q96EF6 278 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 KIRREL1Q96J84 757 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 GUCD1Q96NT3 240 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 GAL3ST1Q99999 423 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 OCSTAMPQ9BR26 566 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 PDE7BQ9NP56 450 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 CEP250Q9BV73 2442 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 KIF26BQ2KJY2 2108 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 LOC100509620A0A075B734 347 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 FAM157AC9JC47 383 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 AP4M1O00189 453 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 ETV2O00321 342 aaPredicted RBP9.22□□□□□ -0.93
SKA1-201ENST00000285116 CD80P33681 288 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 DAP3P51398 398 aaKnown RBP9.22□□□□□ -0.93
SKA1-201ENST00000285116 SUMO3P55854 103 aaPredicted RBP9.22□□□□□ -0.93
SKA1-201ENST00000285116 MOGAT2Q3SYC2 334 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 AKIRIN2Q53H80 203 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 ACTBL2Q562R1 376 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 OR2B11Q5JQS5 317 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 PRSS54Q6PEW0 395 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 FJX1Q86VR8 437 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 C9orf40Q8IXQ3 194 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 AQP10Q96PS8 301 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 WWTR1Q9GZV5 400 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 ZMAT3Q9HA38 289 aaKnown RBP9.22□□□□□ -0.93
SKA1-201ENST00000285116 DMXL2Q8TDJ6 3036 aa9.22□□□□□ -0.93
SKA1-201ENST00000285116 TMEM235A6NFC5 223 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 C11orf98E9PRG8 122 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 H0YIZ8 118 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 MED6O75586 246 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 AHSA1O95433 338 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 NQO2P16083 231 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 AKR1C4P17516 323 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 RAB5AP20339 215 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 LPAR6P43657 344 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 RAB2AP61019 212 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 SGCAQ16586 387 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 BTNL8Q6UX41 500 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 MARCH3Q86UD3 253 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 HOGA1Q86XE5 327 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 SLC22A24Q8N4F4 322 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 OR4D6Q8NGJ1 314 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms