RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SLC7A10Q9NS82 523 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 H7C417 338 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 MRPL33O75394 65 aaKnown RBP18.29■□□□□ 0.52
YBX3-202ENST00000279550 UNC119Q13432 240 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 SNAI3Q3KNW1 292 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 FAAP20Q6NZ36 180 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 PAQR4Q8N4S7 273 aaPredicted RBP18.29■□□□□ 0.52
YBX3-202ENST00000279550 OR1F12Q8NHA8 337 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 SPTSSAQ969W0 71 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 RNF170Q96K19 258 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 GPR137Q96N19 417 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 PRRG4Q9BZD6 226 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 MTFP1Q9UDX5 166 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 V9GYS6 101 aa18.29■□□□□ 0.52
YBX3-202ENST00000279550 IGKV1-9A0A0C4DH69 117 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 OR14I1A6ND48 311 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 MEIS3P1A6NDR6 274 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 OR6C6A6NF89 314 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 WIPF3A6NGB9 483 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 ZNHIT1O43257 154 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 PSG4Q00888 419 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 PMPCAQ10713 525 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 KRTAP27-1Q3LI81 207 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 BTN2A1Q7KYR7 527 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 ZNF627Q7L945 461 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 UQCC2Q9BRT2 126 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 OR2H1Q9GZK4 316 aa18.28■□□□□ 0.52
YBX3-202ENST00000279550 RANGRFQ9HD47 186 aaPredicted RBP18.28■□□□□ 0.52
YBX3-202ENST00000279550 A0A0A6YYJ9 748 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 GSTT2BP0CG30 244 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 FOXG1P55316 489 aaPredicted RBP18.27■□□□□ 0.52
YBX3-202ENST00000279550 AP3S2P59780 193 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 SCRN3Q0VDG4 424 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 DMRTC1Q5HYR2 192 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 Q6ZSR3 168 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 PGAP1Q75T13 922 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 PTX4Q96A99 478 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 PHF21AQ96BD5 680 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 LINC00470Q9BZP3 86 aa18.27■□□□□ 0.52
YBX3-202ENST00000279550 BPNT1O95861 308 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 ERCC1P07992 297 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 H2AFB2P0C5Z0 115 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 VSIG8P0DPA2 414 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 RAB6AP20340 208 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 ZNF93P35789 620 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 ARF1P84077 181 aaKnown RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 CD83Q01151 205 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 RNPS1Q15287 305 aaKnown RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 ZNF324BQ6AW86 544 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 UTS2BQ765I0 119 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 SLC16A14Q7RTX9 510 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 ACBD4Q8NC06 268 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 SSC4DQ8WTU2 575 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 ITFG2Q969R8 447 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 SGK3Q96BR1 496 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 FYTTD1Q96QD9 318 aaKnown RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 EMC3Q9P0I2 261 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 COPZ2Q9P299 210 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 ELF5Q9UKW6 265 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 ZNF175Q9Y473 711 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 C7orf66A4D0T2 115 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 SLC22A20A6NK97 555 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 RBBP9O75884 186 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 APOC1P02654 83 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 MMP7P09237 267 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 FAHP16930 419 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 PRSS3P35030 304 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 OR3A4PP47883 348 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 HTR5AP47898 357 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 RRAS2P62070 204 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 ECH1Q13011 328 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 KCNJ8Q15842 424 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 KRTCAP3Q53RY4 240 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 C9orf135Q5VTT2 229 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 CRIP3Q6Q6R5 217 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 DRAM2Q6UX65 266 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 ZBTB8BQ8NAP8 495 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 OR5M9Q8NGP3 310 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 GPX8Q8TED1 209 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 FAM46BQ96A09 425 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 C1orf147Q96MC9 270 aaPredicted RBP18.26■□□□□ 0.51
YBX3-202ENST00000279550 GHITMQ9H3K2 345 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 BCO1Q9HAY6 547 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 RAB22AQ9UL26 194 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 FLVCR2Q9UPI3 526 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 TIMM10BQ9Y5J6 103 aa18.26■□□□□ 0.51
YBX3-202ENST00000279550 NAP1L6A6NFF2 107 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 ZNF724A8MTY0 619 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 DHRS3O75911 302 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 TGM6O95932 706 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 FCER2P06734 321 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 THBS4P35443 961 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 CBX3Q13185 183 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 PCGF3Q3KNV8 242 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 NUFIP2Q7Z417 695 aaKnown RBP18.25■□□□□ 0.51
YBX3-202ENST00000279550 FGD2Q7Z6J4 655 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 ANGPTL5Q86XS5 388 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 CISD2Q8N5K1 135 aaKnown RBP18.25■□□□□ 0.51
YBX3-202ENST00000279550 OR2AE1Q8NHA4 323 aa18.25■□□□□ 0.51
YBX3-202ENST00000279550 CMBLQ96DG6 245 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms