RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C3orf33Q6P1S2 294 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 ARSKQ6UWY0 536 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 PGAP1Q75T13 922 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 COX15Q7KZN9 410 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 TMEM17Q86X19 198 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 OR4S1Q8NGB4 309 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 OR5L2Q8NGL0 311 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 OR10R2Q8NGX6 335 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 STT3BQ8TCJ2 826 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 IFT46Q9NQC8 304 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 SDHAF3Q9NRP4 125 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 ANAPC10Q9UM13 185 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 IGKV1D-43A0A0B4J1Z2 117 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CEACAM18A8MTB9 384 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 IFNA6P05013 189 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 NAT1P18440 290 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 FKBP2P26885 142 aaKnown RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 PRKXP51817 358 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 FBXW4P57775 412 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CYCSP99999 105 aaKnown RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 BTN1A1Q13410 526 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 PPP1R1AQ13522 171 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 TAF13Q15543 124 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 UQCC3Q6UW78 93 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CD163Q86VB7 1156 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CCDC36Q8IYA8 594 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CHST4Q8NCG5 386 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 THAP6Q8TBB0 222 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 PPP1R1CQ8WVI7 109 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 KCNE4Q8WWG9 221 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 NKX3-1Q99801 234 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 VRK1Q99986 396 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 GAL3ST1Q99999 423 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CST11Q9H112 138 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 MED29Q9NX70 200 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 B3GALT1Q9Y5Z6 326 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 RNF222A6NCQ9 220 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF878C9JN71 531 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 TRIM77I1YAP6 450 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 CDK2AP1O14519 115 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF93P35789 620 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 CASRP41180 1078 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF41P51814 821 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 BIDP55957 195 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 FOXF1Q12946 379 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF273Q14593 569 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 PAN3Q58A45 887 aaKnown RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ANKRD37Q7Z713 158 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ARRDC1Q8N5I2 433 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 INO80EQ8NBZ0 244 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 AGBL5Q8NDL9 886 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 MRGPRFQ96AM1 343 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ADAT3Q96EY9 351 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 DMRTA2Q96SC8 542 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 TMEM185BQ9H7F4 350 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 BARX1Q9HBU1 254 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 SLC22A11Q9NSA0 550 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-201ENST00000277198 GPR160Q9UJ42 338 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 CACNA1GO43497 2377 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 KALRNO60229 2985 aa11.42□□□□□ -0.58
C9orf3-201ENST00000277198 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 RRP8O43159 456 aaKnown RBP11.41□□□□□ -0.58
C9orf3-201ENST00000277198 EFSO43281 561 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 LMX1BO60663 402 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 IGHG1P01857 330 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 CTRB1P17538 263 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 CNR1P21554 472 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 ATRXP46100 2492 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 CX3CR1P49238 355 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 KCNMB1Q16558 191 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF239Q16600 458 aaKnown RBP11.41□□□□□ -0.58
C9orf3-201ENST00000277198 NKPD1Q17RQ9 610 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 CTRB2Q6GPI1 263 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 VASH2Q86V25 355 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 HOGA1Q86XE5 327 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 ANGPTL5Q86XS5 388 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 UEVLDQ8IX04 471 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 OR2AJ1Q8NGZ0 328 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 KCNG3Q8TAE7 436 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 NKD1Q969G9 470 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 MRPS24Q96EL2 167 aaKnown RBP11.41□□□□□ -0.58
C9orf3-201ENST00000277198 SCGB3A2Q96PL1 93 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 PIGMQ9H3S5 423 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 TRBV6-7A0A0A0MS04 114 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 A0A0B4J2A0 478 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 LOC102725191A0A1B0GVB3 256 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 TSPAN4O14817 238 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 HEXBP07686 556 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF20P17024 532 aa11.41□□□□□ -0.58
C9orf3-201ENST00000277198 ATF4P18848 351 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms