RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FCGR2CP31995 323 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 ARRB1P49407 418 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 YBEYP58557 167 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 S100A10P60903 97 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 LDLRAD2Q5SZI1 272 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 C1orf189Q5VU69 101 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 C9orf40Q8IXQ3 194 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SLC26A10Q8NG04 563 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR52L1Q8NGH7 329 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR51L1Q8NGJ5 315 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR2T27Q8NH04 317 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 KCNE4Q8WWG9 221 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CD180Q99467 661 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 ANGPTL4Q9BY76 406 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 KCNK6Q9Y257 313 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 LAMA2P24043 3122 aaKnown RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SCN8AQ9UQD0 1980 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 PATJQ8NI35 1801 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CLDN34H7C241 214 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 KLF8O95600 359 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 F11P03951 625 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 NID1P14543 1247 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 HOXD9P28356 352 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 APOBEC1P41238 236 aaKnown RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 RND3P61587 244 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 GNB2P62879 340 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SPOCK1Q08629 439 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SLC9A3R2Q15599 337 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CEBPEQ15744 281 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 PRAMEF20Q5VT98 475 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 AGBL4Q5VU57 503 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF66Q6ZN08 573 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 GDF7Q7Z4P5 450 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 ADAMTS18Q8TE60 1221 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR5P2Q8WZ92 322 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SGCZQ96LD1 299 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 TBL1XR1Q9BZK7 514 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 NMNAT2Q9BZQ4 307 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 MRPL22Q9NWU5 206 aaKnown RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SIDT1Q9NXL6 827 aaKnown RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SLC7A7Q9UM01 511 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 IGHV2-70DA0A0C4DH43 119 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 C22orf46C9J442 243 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 ETV2O00321 342 aaPredicted RBP8.21□□□□□ -1.09
PDGFC-201ENST00000274071 BPNT1O95861 308 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 OPN1MWP04001 364 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 CTSBP07858 339 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 OPN1MW2P0DN77 364 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 OPN1MW3P0DN78 364 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 CXCR1P25024 350 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 FPR2P25090 351 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 SGSHP51688 502 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 IL15RAQ13261 267 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 Q499Y3 187 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 OPN5Q6U736 354 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF627Q7L945 461 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 OR2AP1Q8NGE2 309 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 OR52E1Q8NGJ3 308 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 THRSPQ92748 146 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 MS4A6EQ96DS6 147 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 ACY3Q96HD9 319 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 CABLES2Q9BTV7 478 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 KIR3DX1Q9H7L2 352 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 SRD5A3Q9H8P0 318 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM242Q9NWH2 141 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 C5AR2Q9P296 337 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 CRLS1Q9UJA2 301 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 KLK13Q9UKR3 277 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 GPR34Q9UPC5 381 aa8.21□□□□□ -1.09
PDGFC-201ENST00000274071 TRAV39A0A0B4J263 110 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF320A2RRD8 509 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 IFNA21P01568 189 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 NHLH1Q02575 133 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 AGERQ15109 404 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 TTC9BQ8N6N2 239 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 LFNGQ8NES3 379 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 C2orf15Q8WU43 125 aaKnown RBP8.21□□□□□ -1.1
PDGFC-201ENST00000274071 AQP3Q92482 292 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-201ENST00000274071 LYSMD1Q96S90 227 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 ABHD14AQ9BUJ0 271 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 RBKSQ9H477 322 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 CST9LQ9H4G1 147 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 BCL2L10Q9HD36 194 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 RAB18Q9NP72 206 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 TM7SF3Q9NS93 570 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF319Q9P2F9 582 aa8.21□□□□□ -1.1
PDGFC-201ENST00000274071 SCN5AQ14524 2016 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 TRBV5-4A0A0C4DH59 114 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 A0A1W2PQH9 124 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 PET100P0DJ07 73 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 SELPP16109 830 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 CD33P20138 364 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 MAKP20794 623 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 UBE2G2P60604 165 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 HLA-DRB3P79483 266 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 FUT5Q11128 374 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms